Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00037 ATGGGGAGAAGAGGAAGTGATGAAAGTGGTGTGAAGAAAGGGCCATGGACTCCGGAAGAGGACACAAGACTTGTGGATTTCATTGAGAAGCATGGCCACGGGAGTTGGAGAGCACTCCCAAAGCTTGCAGGACTCAACAGGTGTGGCAAGAGTTGCAGGCTAAGGTGGACCAACTATCTCAGGCCAGATATCAAAAGAGGAAGCTTCTCAGAGGAAGAACAGCAAACCATCATCAATTTGCATGCACACCTTGGAAACAAGTGGTCAGCTATAGCAGGTCATCTCCCAGGAAGGACTgacaatgaaataaagaacTTGTGGAACACacatttgaagaaaaagctTCTACAGATGGGGATAGACCCAGTTACCCATCGTCCAAGAAGCActgatcatcatcatcatcatctccaGCAATTGCTTGCTGCTGCCCAGATCCAATTGCTGCACTCCATACTCCAAGGACTGATCATGACTTCCAACGTCCCAAACTTACTTAACGATGGAGTATCAGATCATATGGCGTATGAACTATTAGGGACAACTGGTTTCAATTACTCCAACCTTATTCAAGATCAAGATCAAGATCAGCAGGCAGCGCAACCCGACGATCAGTTTCTCTCTAATAATCAACAAGTTGGCAGCAGCACTTACTCTGTCCCAGTCCCAGTCCCCACGCCAAATTATCTGCTTTCTGCACCCTCATCTGATCATGAATGTTCCCCATTAATCGACCATAATCAGTTATTTTCTTCCAGCTTGCGAGATTTCATGGATATTGATGAAGCAAGCAACGCTAATTACTGGAAAGATCTCATCATAGACCAATCATCTAACCAGCCAAGCCATGGTGAATATGCATATCTCTTTGGCAAAGTTGACAGCTG 887 0.4295 MGRRGSDESGVKKGPWTPEEDTRLVDFIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGSFSEEEQQTIINLHAHLGNKWSAIAGHLPGRTDNEIKNLWNTHLKKKLLQMGIDPVTHRPRSTDHHHHHLQQLLAAAQIQLLHSILQGLIMTSNVPNLLNDGVSDHMAYELLGTTGFNYSNLIQDQDQDQQAAQPDDQFLSNNQQVGSSTYSVPVPVPTPNYLLSAPSSDHECSPLIDHNQLFSSSLRDFMDIDEASNANYWKDLIIDQSSNQPSHGEYAYLFGKVDS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00037 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Bva14g00037 295 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bva14g00037 295 SMART sant 12 62 IPR001005 -
Bva14g00037 295 SMART sant 65 113 IPR001005 -
Bva14g00037 295 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bva14g00037 295 CDD SANT 68 111 IPR001005 -
Bva14g00037 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Bva14g00037 295 Gene3D - 12 65 - -
Bva14g00037 295 CDD SANT 15 60 IPR001005 -
Bva14g00037 295 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Bva14g00037 295 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 6 280 - -
Bva14g00037 295 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Bva14g00037 295 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Bva14g00037 295 Gene3D - 68 137 - -
Bva14g00037 295 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 6 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00037 Bva-Chr14 189368 190431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00037 1 281 MYB Transcription Factor Family AT3G02940 45.619 1.77e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva14g00037 Myb_DNA-binding 9.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00037 K09422 - qsu:112006609 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00037 14 189368 190431 Bva14g00037 14 189368 190431 ECH