Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00004 ATGGACACAGCAGCGACTTGCTTCTTCTGTGGCAGAATTCCTAGAAAATTGGCTCCAACGCCACGTACGCGTATGCGTTTCCAAAGTTGTAATGCCTCTAATGTGCCCTTGTCTTCATTTGGATCCTTCTGCCTATTTACTCGTACTAATGTATATGCCTGGTGCAGTTCGTCCCCAACATTTGGGCTCATTCGAAACGGCACTAAAAGTACAAGTAGTAGTAGCAGTGAAACCAAGTCTCCCAATTATACCAAAAGACGAAGAAGAAGGGCTAAGCTCGGTGAAACAAAGACAACCAGTAAAGGGGGAACCTTGCCCTTGCCCTTGCTCATGCCCCtaacagaagaagaagaacctgAACCCAGTAACAGTAACAGTAACAGTAACAGGGtcagaggagagagagaaaatggtaGCATAAACGTGGGTGGTATCCATCAGAATGGAGATCCGCTAGGGTGGAAGGATCTTGGGACGAGCGTGGTGAGGTGGATTTGTCATAGTATGAGGGCCATGGCATCTGATTTTGCTTCTGCTGAGATACAGGGAGAGTTCTCGGAGCTGAGGCAGCGCATGGGTCCGGGTCTTACTTTTGTTATTCAGGCTCAGCCTTATCTCAACGCCGTTCCCATGCCCCTTGGACTTGAAGTTGTCTGCTTGAAAGCCTCTACCCACTATCCTACTCTGTTCGACCACTTTCAGAGGGAGCTTCGAGATGTTCTCCAACACCTCGAGCGAAAATCTTTGGTCCAAAACTGGCGTGAAACTGAGTCCTGGAAACTGCTCAAGGAGCTCGCCAATTCAGCTCAGCATAGGGCAATTGCAAGAAAGATAGCCCAGCGGAAGACTGTTCAAGGCGTTTTGGGAATGGACATAGACAAGGCCAAGGCAATACAGCACAGGATTGATGAATTCACCATGAAAATGTCAGAACTGCTCCGAATAGAAAGGGATGCGGAGTTGGAGTTTACTCAGGAAGAATTGGATGCTGTTCCTAGACCAGATGATACTTCTGATTCATCTAAACCGATTGAGTTCTTGGTTAGCCATGGTCAGGCTCAACAAGAACTCTGTGACAccatttgtaatttaaatgcTATTAGTACATCCACAGGACTAGGGGGAATGCATTTGGTGTTATTCAAGGTAGAAGGGAACCATCGGTTACCACCTACTACACTTTCACCTGGAGACATGGTTTGCGTGAGGACATGTGATAACAGGGGTGCAGGAACAACTTCTTGCGTGCAAGGCTTTGTCAACAATCTTGGGGATGATGGTTGTAGTATCAGTGTTGCTTTAGAGTCACGTCATGGTGATCCTACCTTCTCTAAGCTCTTTGGCAAGACTGTGCGGATTGACCGTATTCAAGGACTGGCTGATACACTTACCTACGAGCGCAATTGTGAAGCCTTAATGCTGCTTCAAAGGAATggtttaaaaaagaagaatcctTCTATTGCTGTTGTGGCCACACTGTTTGGAGATGGAGAAGACATAGCTTGGCTTAAGGAGAATGATTTGGCTGATTGGGCTGATGAAAAATTGAATGGACTATTAGGAAGTGAAACTTTTGATGAATCACAGAAAAGAGCAATAGCAATGGGTTTGAATAAGAAGAGGCCTGTATTGGTTATCCAAGGGCCTCCTGGTACAGGGAAGACAGGTTTGCTCAAGCAACTTATAGCATATGCTGTTCAGCAAGGAGAAAGGGTTCTTGTTACTGCACCTACTAATGCAGCCGTTGATAACATGGTTGAAAAGCTTTCAAATATTGGACTGAACATAGTGCGTGTTGGCAATCCAGCTCGCATCTCAAAAACTGTGGGATCATTGTCGTTGGGAGAAATTGTAAATGCTAAGCTTGCAAGCTTTCGAGAAGAGTATGAAAGGAAGAAGTCAGATCTAAGAAAAGATCTAAGACACTGTTTAAGGGATGATTCTCTAGCTGCTGGAATACGCCAACTTCTAAAACATCTGGGAAGATCactgaagaaaaaggaaaaggagactATGAATGAAGTGCTATCTAGTGCTCAGGTTGTGCTTGCAACTAATACCGGAGCAGCTGATCCTTTGATTCGAAGGCTAAATACCTTTGACTTGGTTGTTATAGATGAAGCTGGACAGGCAATTGAGCCCTCTTGCTGGATTCCTATATTGCAGGGAAAGCGTTGCATCCTTGCTGGTGACCAATGCCAACTTGCTCCAGTTATATTATCTAGAAAGGCTTTAGAAGGTGGTCTTGGAATATCTTTACTAGAGAGAGCTGCAACTTTGCATGAAGGGATTCTTACCACCAAATTAACAACACAATACCGAATGAATGATGCAATTGCCGGTTGGGCGTCAAAGGAGATGTATGGAGGATCATTGAAGTCCTCCAAGACTGTGCATTCTCATCTTCTAGTAGACTCTCCTTTTGTTAAGCCAACATGGATAACGCAATGCCCTCTGCTATTGCTTGATACTAGAATGCCATATGGAAGTTTGTCTGTTGGTTGTGAAGAGCATCTAGATCCAGCAGGAACAGGCTCATTTTACAATGAAGGGGAAGCTGATATTGTCGTGCAGCATGTCTTTTCCCTAATTTATGCAGGTGTTAGTCCTACTGCTATAGTAGTGCAATCTCCTTATGTCGCTCAGGTGCAACTTTTAAGGGACAGGCTTGATGAGCTGCCAGAGGCCGCAGGTACTGAGGTTGCAACTATTGATAGCTTTCAAGGTCGGGAAGCCGATGCAGTAATTATATCCATGGTTCGTTCAAACACTTTAGGTGCTGTTGGATTCCTTGGGGATAGCAGAAGAATCAACGTTGCCATCACAAGGGCACGGAAACATGTAGCAGTCGTATGCGATAGCTCAACAATATGCCACAATACATTCTTAGCAAGGCTTCTGCGTCACATCCGCTATTTTGGCAGGGTGAAGCATGCGGAACCAGGTGGTTTTGGAGGATCTGGACTTGGGACGAATCCAATGTTACCTTCCCATAGCTA 2999 0.4378 MDTAATCFFCGRIPRKLAPTPRTRMRFQSCNASNVPLSSFGSFCLFTRTNVYAWCSSSPTFGLIRNGTKSTSSSSSETKSPNYTKRRRRRAKLGETKTTSKGGTLPLPLLMPLTEEEEPEPSNSNSNSNRVRGERENGSINVGGIHQNGDPLGWKDLGTSVVRWICHSMRAMASDFASAEIQGEFSELRQRMGPGLTFVIQAQPYLNAVPMPLGLEVVCLKASTHYPTLFDHFQRELRDVLQHLERKSLVQNWRETESWKLLKELANSAQHRAIARKIAQRKTVQGVLGMDIDKAKAIQHRIDEFTMKMSELLRIERDAELEFTQEELDAVPRPDDTSDSSKPIEFLVSHGQAQQELCDTICNLNAISTSTGLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRTCDNRGAGTTSCVQGFVNNLGDDGCSISVALESRHGDPTFSKLFGKTVRIDRIQGLADTLTYERNCEALMLLQRNGLKKKNPSIAVVATLFGDGEDIAWLKENDLADWADEKLNGLLGSETFDESQKRAIAMGLNKKRPVLVIQGPPGTGKTGLLKQLIAYAVQQGERVLVTAPTNAAVDNMVEKLSNIGLNIVRVGNPARISKTVGSLSLGEIVNAKLASFREEYERKKSDLRKDLRHCLRDDSLAAGIRQLLKHLGRSLKKKEKETMNEVLSSAQVVLATNTGAADPLIRRLNTFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEGGLGISLLERAATLHEGILTTKLTTQYRMNDAIAGWASKEMYGGSLKSSKTVHSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGSFYNEGEADIVVQHVFSLIYAGVSPTAIVVQSPYVAQVQLLRDRLDELPEAAGTEVATIDSFQGREADAVIISMVRSNTLGAVGFLGDSRRINVAITRARKHVAVVCDSSTICHNTFLARLLRHIRYFGRVKHAEPGGFGGSGLGTNPMLPSHS 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00004 999 MobiDBLite consensus disorder prediction 118 135 - -
Bva14g00004 999 Pfam AAA domain 525 741 IPR041677 GO:0004386
Bva14g00004 999 Pfam AAA domain 751 954 IPR041679 -
Bva14g00004 999 SMART AAA_5 540 755 IPR003593 -
Bva14g00004 999 Gene3D - 328 459 - -
Bva14g00004 999 CDD DEXXQc_SMUBP2 525 774 - -
Bva14g00004 999 MobiDBLite consensus disorder prediction 65 80 - -
Bva14g00004 999 MobiDBLite consensus disorder prediction 65 144 - -
Bva14g00004 999 Coils Coil 626 646 - -
Bva14g00004 999 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 67 998 - -
Bva14g00004 999 SMART ultradead3 521 773 IPR014001 -
Bva14g00004 999 Gene3D - 308 757 IPR027417 -
Bva14g00004 999 Gene3D - 773 981 IPR027417 -
Bva14g00004 999 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 524 962 IPR027417 -
Bva14g00004 999 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 67 998 - -
Bva14g00004 999 CDD SF1_C_Upf1 775 971 IPR041679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00004 Bva-Chr14 25070 35231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00004 513 714 Core DNA Replication Machinery Family AT1G08840 25.000 1.29e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00004 - - aip:107625008 1519.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00004 14 25070 35231 Bva14g00004 14 25070 35231 ECH