Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03555 ATGGGGTCCTGCTTCTCCTCGGAAAGCAGGAGCCCATTTCCCACTTCATCCTCGGATGTCAGGAAAAGGAAGAACTCGAAAAAAAGACAGGGATCACAAGGTTCTTCCTTTGAGCATTGGAAGGGTGAACCACTCCATAGAATTCCAGGGAGGATGTTCATGAATGGGTCTAGTCAAGCTGCGTCCTTGTTTACACAACAAGGCAAGAAAGGGACAAATCAAGACGCCATGATTGTTTGGGAGAATTTTTGTTCTAGGAAGGATACTATCTTCTGTGGAGTTTTTGATGGTCATGGTCCATTTGGCCATATGGTTGCCAAAAAAGTGAGGGATTCTCTTCCTCTCAAACTGAGTGCTACTTGGGAGCTTAATGCATCTGGGGAGGAAGTCCTCAAAGAGATCAGCTTTAATGCGGCAGAAAGCATGAATTCTGAAGAGGCCACGTTTGCATCTGCTGATGAGGAATCCAGGGCATCCGTTGATGCCGaggaaacagaaaaatacccTGAGATCTTTCAGACACTTAAAGAATCATTTTTGAAGGCATTCAGTGTCATGGACAGGGAACTGAAGATGCACCCAAGTATTGATTGCTTTTGCAGTGGGACAACTGCAGTAACTCTGGTTAAGCAGGGCCGGGATCTTGTCATTGGAAATGTTGGCGACTCTAGAGCTGTGCTGGGTATGAGAGACAAAGATGATTCCCTTGTTGCTGTTCAGTTAACTGTTGATCTAAAACCCAGTCTTCCAGCGGAAGCAGAGAGAATACGCAAATGTAAAGGGCGTGTTTTTGCTCTTCAGGATGAACCCGAGGTTGCTCGAGTCTGGTTGCCAAACTATGACTCCCCTGGCCTTGCCATGGCCCGGGCTTTTGGAGAtttttgtctcaaagattTTGGTCTGATATCTGTTCCAGAGATATCTTACCGTCGCCTGAGTGAGAAGGACGAATTCATTGTGTTGGCAACCGACGGGATTTGGGATGTGTTGTCAAATAAAGAAGTGGTGGACATTATAGGAACAGCTCCGAGACGTTCCTGGGCAGCTCGAACACTGGTTGAGGCAGCAGTTCGAGCTTGGAAATATAAATACCCAACTTCCAAAGTGGATGATTGTGCTGTGGTTTGCTTATTCCTTGACTCGGATTCGCAGAAATTATTATGTAGCGCTTCCCGCATTAATTCCAAATCCGAAGAGAGTAGTGTTGTTGAGGATGGAACAAGCGTTCTGGAAAGGTCAGGGACTTGCCGGGCAAGTAATGAGCAAGTGTCAGCGTCAGAGGAGAAGGAGATAGATGCTTTTGCGGAGTCAGAAAGGGAATGGTCAGCTCTTGAAGGAGTATCTCGGGTAAACACATTACTGAATCTGCCCAGATTTGTTCCTACTGCTACTGCCAAAGCTGACGATGATCATGGGACCAGTATCAGAAGACGCAAATA 1439 0.4552 MGSCFSSESRSPFPTSSSDVRKRKNSKKRQGSQGSSFEHWKGEPLHRIPGRMFMNGSSQAASLFTQQGKKGTNQDAMIVWENFCSRKDTIFCGVFDGHGPFGHMVAKKVRDSLPLKLSATWELNASGEEVLKEISFNAAESMNSEEATFASADEESRASVDAEETEKYPEIFQTLKESFLKAFSVMDRELKMHPSIDCFCSGTTAVTLVKQGRDLVIGNVGDSRAVLGMRDKDDSLVAVQLTVDLKPSLPAEAERIRKCKGRVFALQDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPEISYRRLSEKDEFIVLATDGIWDVLSNKEVVDIIGTAPRRSWAARTLVEAAVRAWKYKYPTSKVDDCAVVCLFLDSDSQKLLCSASRINSKSEESSVVEDGTSVLERSGTCRASNEQVSASEEKEIDAFAESEREWSALEGVSRVNTLLNLPRFVPTATAKADDDHGTSIRRRK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03555 479 MobiDBLite consensus disorder prediction 1 19 - -
Bva13g03555 479 Pfam Protein phosphatase 2C 107 343 IPR001932 -
Bva13g03555 479 ProSiteProfiles PPM-type phosphatase domain profile. 60 379 IPR001932 -
Bva13g03555 479 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 455 - -
Bva13g03555 479 MobiDBLite consensus disorder prediction 1 42 - -
Bva13g03555 479 PANTHER ALPHABET, ISOFORM E-RELATED 1 455 - -
Bva13g03555 479 SUPERFAMILY PP2C-like 51 380 IPR036457 -
Bva13g03555 479 SMART PP2C_4 52 377 IPR001932 -
Bva13g03555 479 CDD PP2Cc 61 379 IPR001932 -
Bva13g03555 479 Gene3D - 53 381 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03555 Bva-Chr13 24017245 24020971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03555 1 461 PP2C-type Phosphatase Gene Family AT3G02750 60.952 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03555 - - gmx:100782003 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03555 13 24017245 24020971 Bva13g03555 13 24017245 24020971 ECH