Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03537 atgttCAAATTCTTGAAAGACGTCGTTGGTGGATCCGGAACTGGACTCAAAGATCTCCCATACAATATTGGCGAACCCTACCCTTCTGCATGGGGCTCCTGGACTCACTACCGTGGTACCTCCAAGGATGATGGTTCTCTAGTGTCAATCTTTTCCCTTTCTGGGAATAATGCTCAGGATGGATATTTAGCTGCTGGTCGTAATGGTGTCAAGCGTCTTCGAATTGTCAGGCATCcaaatattttgtcatttcttCACAGTACTGAGACTGAAACTTATGATGGTGGTTCTACCAAGGCTACAATCTATATTGTAACAGAGCCTGTAATGCCACTATCTGAAAAGATTAAGGAGTTAGGACTAGAAGGTACACAAAGGGATGAATATTATGCCTGGGGGCTGCACCAAATAGCTAAAGCTGTGAGCTTCTTGAACAATGACTGTAAACTTGTTCATGGCAATGTTTGTTTGGCTAGTGTTGTTGTCACACAAACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTATCAGAATTTGAGGGGAACGAAACTTCTACTGGGCAAATGCTGCGATATGCATGGCTTGTTGAATCACAATACAAACCAATGGAGTTGGTAAAATCTGACTTGGCCATGATGAAAAAGTCTCCTCCTTGGGCAATTGATTCTTGGGGTATGGGTTGTCTGATCTACGAGCTATTCTCTGGTATGAAGTTGCGCACAACAGAGGAGTTGCGTAACACTACTTCCATTCCTAAGTCTCTGCTTCCAGATTACCAGCGACTATTGAGTTCCATGCCTTCTCGGAGATTAAATACATCAAAGCTTGTAGAAAACAGTGAATATTTTCATGGcaagctagtagaaacaatACATTTTATGGAAATTCTTAGTTTGAAAGACAGTGTTGAGAAAGACTCCTTCTTCCGCAAGCTTCCAAATTTGGCAGAGCAGCTTCCTCGTCAGATTGTGTTGAAGAAGTTGCTTCCTTTATTGGCTTCTGCTCTTGAATTTGGTTCAGCTGCTGCCCCTGCTTTGACTGCATTGTTGAAAATTGGTTCTTGGCTTTCTGCTGAAGAATTTAATGTTAAGgtACTTCCAACAATTGTAAAACTATTTACCTCAAATGATCGAGCTATCCGAGTTTCCCTTCTTCAGCATATTGATCAGTATGGAGAGTCATTATCAGCACAAGTTGTTGATGAGCAGGTTTATCCTCATGTTGCCTCTGGGTTCTCTGACACAAATGCTTTTCTGAGGGAAATGACTCTTAAGTCCATGCTGATTCTGGCTCCAAAGCTTTCTCAAAGGAGTATATCAGGGTCGTTATTGAAGTATCTATCTAAGTTACAGGTTGATGAGGAACCAGCAATCCGGACAAATACTACCATCTTATTAGGGAATATTGCTAACTACCTGAATGAAGGGACAAGGAAAAGGGTTTTGGTTAATGCATTTACAGCCCGTGCATTACGTGATACGTTTCCACATGCCAGAGCAGCAGGGATTATGGCGTTATCTGCAACAAGTTCCTATTATGATACCACTGAAATTGCTACTCGGATTCTTCCTAATGTTATTGTACTAACAATTGATCCTGACAGTGATGTTCGATCTAAGGCTTTTCAAGCTGTTGATCAATTTTTGCTGATCGTGAAGCAATATTATGAAAAGACAAATGCAGTAGATACTGCCGGCACTTCAAGCATTGGAATTTCTTCAATTCCAGGAAATGCTGGTTTACTTGGATGGGCTATGAGCTCCTTGACCCTGAAGGGTAAACCTTCTGATCATGCTCCAGTCTCTTCCGTGAGTTCCAGTGCACTTACTCCTACAACTTCAAATGTCAACTCAGGTATAGACAACCCATCAGCAGCACCTATCCTTGTAAGTTCTACCACAGATCTGGCCGAAATCCCTGGCCCTCCTTCCCCTACATCAACGGATGGCTGGGGAGAGATTGAGAATGGAATCCATGAAGAGGAGGAAAACGAAAAGGATGGGTGGGATGATCTAGAACCGCTTGAAGAGCCAAAGCCTTCTCCAGCCCTTTTAAACATTCAAGCAGCTCAAAGGCGGCCAGTCTCTCATCCTGTTTCTCAGACAAAACAAGCCTCAAGTTTAAGACCGAAAAGTACTGCAAAGTTGAGCAAGGATGAGGATGATGATTTGTGGGGCTCCATAGCAGCTCCTGCTCCAAAATCGTCAAAACCTTTAAATCTGAAATCAAATGGAATTGATGACGATGATCCCTGGGCTGCCATTGCTGCTCCTGCTCCCACTACTAAGGCCAAGCCTTTATCAGCTGGCAGAGGTCGGGGAACTAAACCTGCTGCTCCAAAATTGGGTGCTCAGAGAATAAACCGGACATCGTCTGGGATGTG 2384 0.4262 MFKFLKDVVGGSGTGLKDLPYNIGEPYPSAWGSWTHYRGTSKDDGSLVSIFSLSGNNAQDGYLAAGRNGVKRLRIVRHPNILSFLHSTETETYDGGSTKATIYIVTEPVMPLSEKIKELGLEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFEGNETSTGQMLRYAWLVESQYKPMELVKSDLAMMKKSPPWAIDSWGMGCLIYELFSGMKLRTTEELRNTTSIPKSLLPDYQRLLSSMPSRRLNTSKLVENSEYFHGKLVETIHFMEILSLKDSVEKDSFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKIGSWLSAEEFNVKVLPTIVKLFTSNDRAIRVSLLQHIDQYGESLSAQVVDEQVYPHVASGFSDTNAFLREMTLKSMLILAPKLSQRSISGSLLKYLSKLQVDEEPAIRTNTTILLGNIANYLNEGTRKRVLVNAFTARALRDTFPHARAAGIMALSATSSYYDTTEIATRILPNVIVLTIDPDSDVRSKAFQAVDQFLLIVKQYYEKTNAVDTAGTSSIGISSIPGNAGLLGWAMSSLTLKGKPSDHAPVSSVSSSALTPTTSNVNSGIDNPSAAPILVSSTTDLAEIPGPPSPTSTDGWGEIENGIHEEEENEKDGWDDLEPLEEPKPSPALLNIQAAQRRPVSHPVSQTKQASSLRPKSTAKLSKDEDDDLWGSIAAPAPKSSKPLNLKSNGIDDDDPWAAIAAPAPTTKAKPLSAGRGRGTKPAAPKLGAQRINRTSSGM 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03537 794 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Bva13g03537 794 SMART serkin_6 37 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g03537 794 MobiDBLite consensus disorder prediction 595 626 - -
Bva13g03537 794 PANTHER - 1 792 - -
Bva13g03537 794 ProSiteProfiles HEAT repeat profile. 365 403 IPR021133 -
Bva13g03537 794 MobiDBLite consensus disorder prediction 661 680 - -
Bva13g03537 794 MobiDBLite consensus disorder prediction 693 712 - -
Bva13g03537 794 SUPERFAMILY ARM repeat 292 554 IPR016024 -
Bva13g03537 794 ProSiteProfiles Protein kinase domain profile. 2 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g03537 794 SUPERFAMILY Protein kinase-like (PK-like) 34 285 IPR011009 -
Bva13g03537 794 Gene3D Transferase(Phosphotransferase) domain 1 110 279 - -
Bva13g03537 794 Gene3D - 282 559 IPR011989 -
Bva13g03537 794 MobiDBLite consensus disorder prediction 599 626 - -
Bva13g03537 794 Pfam Protein kinase domain 37 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g03537 794 MobiDBLite consensus disorder prediction 691 794 - -
Bva13g03537 794 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 1 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03537 Bva-Chr13 23939892 23949223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03537 70 279 MAP Kinase Kinase Kinase AT5G66850 25.333 5.31e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Bva13g03537 Pkinase 1.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03537 K08876 - gmx:100792884 1264.21