Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03508 ATGGAGATTGAGAAAGTGAAGTTAGAAGAGCAAGTAGGAAACAGAGCAAGAAAGGGGAGGTCAAGAAAAGGGTGCATGAAAGGGAAAGGGGGTCCAGAGAATGCCCTGTGCACTTACAGAGGAGTGAGACAGAGAACTTGGGGGAAATGGGTGGCCGAAATACGAGAGCCCAACCGTGGGGCTAGGCTTTGGCTTGGCACTTTTAACACCTCCGTTGAAGCGGCACATGCTTACGATGAAGCAGCAACAAAGCTTTATGGCTCCAATGCTAAGCTCAATTTAGCGCCAAGTCACAACAATGATCCATCACCCTCTCGTGCACCCGCTGCCTCTAGCGAAGGAATTGAGACTCAGATGCCTGCGGAAGCTGCTTCGCCCAGCTTATTCATCTCCGACCAGACAACAAGCACTTGGGTGCTTGGACTCGGGGACATCTGGGAGAACTTGGACCGTCAAGCACCTACTACTACTAATACTACCCCCTGGGTTACTGATTTTACGGAACCCAATCACACAATATTCGATCAAGAGCTCAAGGACTGGAATGGATTATTGCAACTTCCTTTCGGCAGCTA 575 0.4991 MEIEKVKLEEQVGNRARKGRSRKGCMKGKGGPENALCTYRGVRQRTWGKWVAEIREPNRGARLWLGTFNTSVEAAHAYDEAATKLYGSNAKLNLAPSHNNDPSPSRAPAASSEGIETQMPAEAASPSLFISDQTTSTWVLGLGDIWENLDRQAPTTTNTTPWVTDFTEPNHTIFDQELKDWNGLLQLPFGS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03508 191 MobiDBLite consensus disorder prediction 93 112 - -
Bva13g03508 191 CDD AP2 37 97 IPR001471 GO:0003700|GO:0006355
Bva13g03508 191 SUPERFAMILY DNA-binding domain 38 95 IPR016177 GO:0003677
Bva13g03508 191 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Bva13g03508 191 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 15 121 - -
Bva13g03508 191 MobiDBLite consensus disorder prediction 93 115 - -
Bva13g03508 191 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
Bva13g03508 191 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Bva13g03508 191 PRINTS Ethylene responsive element binding protein signature 61 77 IPR001471 GO:0003700|GO:0006355
Bva13g03508 191 Pfam AP2 domain 38 87 IPR001471 GO:0003700|GO:0006355
Bva13g03508 191 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 15 121 - -
Bva13g03508 191 Gene3D AP2/ERF domain 38 95 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03508 Bva-Chr13 23827423 23828023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03508 9 95 AP2-EREBP Transcription Factor Family AT5G18450 82.955 1.57e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva13g03508 AP2 1.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03508 - - vvi:100248518 156.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03508 13 23827423 23828023 Bva13g03508 13 23827423 23828023 ECH