Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03505 ATGGCTAATTCTCTAAGTTGCTCAGCCTCCGAACTAGCCCCGCTATTCAGCACCTCCACAAACGCAACCACCGCAGCCAACTACCTGTGCTCCCAATTTGATAGTATTTCGAAAAAACTCAGTGACGCCACCTATGCTGTTGACAACACCTACCTTCTCTTCTCAGCCTATCTTGTGTTCGCCATGCAGCTTGGTTTTGCAATGCTCTGCGCCGGTTCGGTTCGCGCAAAGAACACCACGAACATCATGCTCACCAATGTTTTGGACGCCGCTGCCGGTGGCCTCTCCTACTACCTTTTCGGTTTCGCTTTCGCCTTTGGTTCGCCCTCCAACGGCTTTATAGGGCGCCACTTGTTCGGCCTCAGAGACTACCCTTCCCCTTCTGGGGACTACAGCTTCTTCCTTTATCAATGGGCTTTTGCAATTGCAGCCGCTGGGATTACCAGCGGTTCTATCGCCGAGAGAACCCAGTTCGTGGCTTATCTTATATACTCCTCTTTCTTGACGGGCTTCGTCTATCCCATCGTTTCTCATTGGATTTGGTCGTCTGATGGGTGGGCCAGCCCAACTCGAACCGGTAACGACCTTTTATTTGGATCGGGTGCTATCGACTTTGCTGGTTCGGGTGTGGTTCATATGGTTGGCGGCATAGCGGGGTTCTGGGGTGCTATCATTGAAGGACCAAGAATTGGCCGGTTCGACCGGAGCGGTCGGTCCGTGGCCTTACGCGGTCACAGTGCCTCCCTGGTGGTCCTTGGCTCCTTTCTACTATGGTTCGGGTGGTACGGCTTCAACCCGGGATCGTTCCTCACCATCTCGAAATCTTACAGTAGCGGCGAAGGGTACTATGGTCAATGGAGCGCCGTCGGGAGGACAGCCGTGACAACGACACTGGCTGGGTGCACAGCGGCTCTTACTACGTTATTTGGTAAACGGTTGTTGGTTGGACACTGGAACGTCATTGACGTGTGTAACGGTCTTCTTGGGGGTTTTGCTGCGATAACGTCAGGGTGTTCTGTCGTGGAACCATGGGCAGCAATCCTCTGTGGGTTTGTGGCGGCGTGGGTTCTGATAGGGTTCAACAAGTTAGCAATGATGTTCAAGTACGACGATCCACTAGAGGCGGCGCAACTCCACGGAGGGTGTGGAGCGTGGGGCGTATTGTTCACGGGATTGTTTGCCAAGGAAGCTTACGTGAATCAAGTGTACGGAGGAGGGAGACCGTACGGGTTAGTGATGGGCGGAGGAGGGAAGCTGTTGGGGGCGCAGATAGTGGAGATATTGGTGGTGAGTGGGTGGGTGACGGCGACGATGGCTCCACTGTTTTATGggttgaagaagatgaagttgTTGAGGATATCAAGTGACGACGAGATGGCCGGGATGGACTTGACACGACACGGTGGCTTTGCCTATGCCTATCACGACGAACAAGATGGTGATTCAACTAAGCCTTCCATGTTTATGATGGGGAAGATAGAGCCTGCTACTAGCACTCCCACACCTCATCCATCACCGCCGCAACCTCAACCTCAAGTATG 1541 0.5289 MANSLSCSASELAPLFSTSTNATTAANYLCSQFDSISKKLSDATYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTTNIMLTNVLDAAAGGLSYYLFGFAFAFGSPSNGFIGRHLFGLRDYPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWIWSSDGWASPTRTGNDLLFGSGAIDFAGSGVVHMVGGIAGFWGAIIEGPRIGRFDRSGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTISKSYSSGEGYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLVGHWNVIDVCNGLLGGFAAITSGCSVVEPWAAILCGFVAAWVLIGFNKLAMMFKYDDPLEAAQLHGGCGAWGVLFTGLFAKEAYVNQVYGGGRPYGLVMGGGGKLLGAQIVEILVVSGWVTATMAPLFYGLKKMKLLRISSDDEMAGMDLTRHGGFAYAYHDEQDGDSTKPSMFMMGKIEPATSTPTPHPSPPQPQPQV 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03505 513 MobiDBLite consensus disorder prediction 499 513 - -
Bva13g03505 513 PANTHER AMMONIUM TRANSPORTER 1 504 - -
Bva13g03505 513 Pfam Ammonium Transporter Family 51 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bva13g03505 513 ProSitePatterns Ammonium transporters signature. 204 229 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bva13g03505 513 Gene3D Ammonium transporter AmtB like domains 25 489 IPR029020 -
Bva13g03505 513 SUPERFAMILY Ammonium transporter 45 453 - -
Bva13g03505 513 TIGRFAM amt: ammonium transporter 48 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bva13g03505 513 PANTHER AMMONIUM TRANSPORTER 1 504 - -
Bva13g03505 513 MobiDBLite consensus disorder prediction 484 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03505 Bva-Chr13 23814610 23816369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03505 27 505 Inorganic Solute Cotransporters AT1G64780 80.913 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03505 K03320 K07573 qsu:112038007 825.854