Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03497 ATGGAACCCAATGAAAACCAACTCAGCTCCTACTACCACCATCAACAGCAGCAGAGCACCACCTCTTCCGTCAGCCCTACAACCGCCGTCACCACCACCACACCCTCACCAACCAATGGCCTATTACCAAACACTGAGGGTTCCCACATGGTCTACCCTCACTCCGTGCCCTCTGCGGTGTCGTCCCAGCTAGAACCGGCAAAGAGGAAGAGAGGCAGGCCCAGGAAGTACTTTACGCCTGAGCAAGCTCTAGCAGCTAAGAAAGctgcttcatcttcatctcaCTCTTTTTCTTCCAAGGATAAGAAGGAACATACCTTAGCTGCTGGCTCTGCTTCATCTTCTTATAAGAAATCCCAGTCGTTTGGTTTAGGCAATGCAGGACAAGGTTTCACTCCACATGTCATTACTGTTGCTGCTGGTGAGGATGTTGCCCAGAAAATTATGTTGTTCACTCAACAAAGTATGCGAGAAATATGCATTTTGTCTGCATCTGGTTCGATCTCTAATGCCTCTCTTCGGCAGCCAGCAACCTCTGGAGGCAATGTTGCATATGAGGGCCGTTTTGAGATCATTTCACTTTCTGGTTCTTATGTTCGTACTGAACTTGGAGGGCGGACTGGTGGTCTCAGTGTATGCTTATCTAGTACTGATGGCCAAATCATAGGTGGAGGAGTTGGTGGGCCATTAAAAGCTGCTGGTCCAGTTCAGGTAATTGTGGGTACGTTTTCTATTGACACCAAGAGGGATGCTAGCGCTGCTGTCAAAGGGGATGCTTCTGCGAGCAAGTTGCCATCACCGGTGGGCGAATCAGTGTCAGGTTTAGGATTCCGCCCAGCAATTGACTCTTCCAGTGGTAATCCTATTCGGGGAAATGATGATCATCAGGCCATTGGAGGAAGTCATTTCATGATTCAACAGCGTGGTATGCACATGACGCCTTCCAGGCCCACAGATTGGGGAGGGCGTCTCGATTCAAGAAATGCTGGCTATGAACTGACAGGAAGAACAGTTCATGGGGCACACCAGTCCCCCGAAAACGGGGATTATGATCAAATTCCTGACTG 1067 0.4864 MEPNENQLSSYYHHQQQQSTTSSVSPTTAVTTTTPSPTNGLLPNTEGSHMVYPHSVPSAVSSQLEPAKRKRGRPRKYFTPEQALAAKKAASSSSHSFSSKDKKEHTLAAGSASSSYKKSQSFGLGNAGQGFTPHVITVAAGEDVAQKIMLFTQQSMREICILSASGSISNASLRQPATSGGNVAYEGRFEIISLSGSYVRTELGGRTGGLSVCLSSTDGQIIGGGVGGPLKAAGPVQVIVGTFSIDTKRDASAAVKGDASASKLPSPVGESVSGLGFRPAIDSSSGNPIRGNDDHQAIGGSHFMIQQRGMHMTPSRPTDWGGRLDSRNAGYELTGRTVHGAHQSPENGDYDQIPD 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03497 355 CDD DUF296 132 243 IPR005175 -
Bva13g03497 355 Pfam Plants and Prokaryotes Conserved (PCC) domain 133 244 IPR005175 -
Bva13g03497 355 MobiDBLite consensus disorder prediction 1 105 - -
Bva13g03497 355 Gene3D - 133 258 - -
Bva13g03497 355 MobiDBLite consensus disorder prediction 313 355 - -
Bva13g03497 355 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 347 - -
Bva13g03497 355 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 347 IPR039605 GO:0003680
Bva13g03497 355 MobiDBLite consensus disorder prediction 277 297 - -
Bva13g03497 355 ProSiteProfiles PPC domain profile profile. 127 264 IPR005175 -
Bva13g03497 355 MobiDBLite consensus disorder prediction 1 45 - -
Bva13g03497 355 SUPERFAMILY AF0104/ALDC/Ptd012-like 129 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03497 Bva-Chr13 23778728 23785512 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03497 26 355 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 53.261 3.64e-104 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03497 - - gmx:100809675 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03497 13 23778728 23785512 Bva13g03497 13 23778728 23785512 ECH