Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03494 ATGGCGAACCGGTGGTGGACTGGGTCTGTGGGTCTGGCCGGAGTTGAAAACTCTGCCAGCTCCCCTCCCTTGAAGAAACCAGATCTGGGCATATCCATGAATGACAGTGGTGTTCCGGCTggggatgaagaagaagagagagaaaacagCACTGATGACCCTAAGGAAGGAGCTATCGAAGTGGCGACCACGCGCCGCCCTAGAGGGCGTCCACCAGGCTCAAAGAACAAGCCAAAGCCACCCATATTTGTGACTAGGGATAGCCCTAATGCACTCCGAAGCCATGTGATGGAGGTATCTAATGGAGCAGATATTGTCGATTGTGTGGTTCAGTTCGCTAGAAGGCGTCAAAGAGGAGTCTGCGTTCTCAGTGGCAGTGGCACCGTCGTCAACGTGAATCTTCGCCAACCAAATGCCCCTGGCACCGTCATGGCACTTCCCGGCCGCTTCGAGATACTATCCTTAACCGGTTCGTTTCTTCCAACACCGGCTCCACCAGGTTCCAACGGTCTAACCATATACCTAGCGGGAGTTCAAGGTCAAGTGGTGGGTGGTGTGGTCGTGGGTCCTTTGATGGCATCAGGACCTGTTTTGATAGTGGCAGCTACCTTTTCCAACGCCACCTACGACAGATTACCCGTTGAGGATATTGAAGACGAAGCACAGGGACAACTCACGGCCTGCGGTGGCGGTGGATCTCCGCCAATTCCCGGTGGCAGTGGTGGCCAGCAGTCAGGTCCGGGTGGGTCAATGGGAGAGGGTTCCTCATCTATGCCTGTATATAATCTTCAGTCGAATATGCTTGGTAACGGTGCACACTTGAATCACGAAGCTTATAATTGGGCTCACGGTAATACTCCGGGCAGGTCATCCTATTG 878 0.5228 MANRWWTGSVGLAGVENSASSPPLKKPDLGISMNDSGVPAGDEEEERENSTDDPKEGAIEVATTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVSNGADIVDCVVQFARRRQRGVCVLSGSGTVVNVNLRQPNAPGTVMALPGRFEILSLTGSFLPTPAPPGSNGLTIYLAGVQGQVVGGVVVGPLMASGPVLIVAATFSNATYDRLPVEDIEDEAQGQLTACGGGGSPPIPGGSGGQQSGPGGSMGEGSSSMPVYNLQSNMLGNGAHLNHEAYNWAHGNTPGRSSY 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03494 292 MobiDBLite consensus disorder prediction 238 262 - -
Bva13g03494 292 MobiDBLite consensus disorder prediction 1 89 - -
Bva13g03494 292 Gene3D - 92 221 - -
Bva13g03494 292 CDD DUF296 93 176 IPR005175 -
Bva13g03494 292 Pfam Plants and Prokaryotes Conserved (PCC) domain 93 206 IPR005175 -
Bva13g03494 292 ProSiteProfiles PPC domain profile profile. 89 224 IPR005175 -
Bva13g03494 292 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 217 - -
Bva13g03494 292 PIRSF ESCAROLA 10 292 IPR014476 GO:0003680
Bva13g03494 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 7 286 - -
Bva13g03494 292 MobiDBLite consensus disorder prediction 224 262 - -
Bva13g03494 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 286 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03494 Bva-Chr13 23764894 23766277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03494 1 287 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 56.376 8.70e-92 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03494 - - qsu:112038015 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03494 13 23764894 23766277 Bva13g03494 13 23764894 23766277 ECH