Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03492 ATGTCGAATCCGAAAGTGTTCTTCGACATTATAATTGGAAGGATGAAAGCGGGTCGTGTTGTAATGGAAATATTTGCCGATGTCACCCCAAAGACAGCGGAAAACTTTCGAGCTCTGTGCACCGGGGAAAAGGGTATTGGAAGATCTGGGAAACCTTTACACTATAAAGGATCCGCGTTTCATCGAAttattccaaacttcatgTGTCAGGGAGGAGATTTCACCAGAGGAAATGGGACAGGAGGTGAGTCAATTTATGGCACGAAATTTAATGATGAGAATTTCAAGCTGAAGCATACGGGGCCTGGTGTGCTCTCAATGGCAAATTCTGGACCTAATACAAATGGTTCTCAGTTCTTTATATGTACTGAGAGGACGCCATGGCTTGATGGGAAACACGTTGTATTTGGAAAAGTGGTTGATGGCTACTCTGTAGTTAAGGAGATGGAGAAGGTCGGTTCAGAGAGTGGGATTACTTCAGCGTCAGTTATAATTGAAGATTGCGGTCAGATAACAGAGAATTG 524 0.4237 MSNPKVFFDIIIGRMKAGRVVMEIFADVTPKTAENFRALCTGEKGIGRSGKPLHYKGSAFHRIIPNFMCQGGDFTRGNGTGGESIYGTKFNDENFKLKHTGPGVLSMANSGPNTNGSQFFICTERTPWLDGKHVVFGKVVDGYSVVKEMEKVGSESGITSASVIIEDCGQITEN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03492 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 130 IPR002130 GO:0000413|GO:0003755
Bva13g03492 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 146 IPR002130 GO:0000413|GO:0003755
Bva13g03492 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Bva13g03492 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 72 IPR002130 GO:0000413|GO:0003755
Bva13g03492 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 118 IPR002130 GO:0000413|GO:0003755
Bva13g03492 174 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 170 IPR002130 GO:0000413|GO:0003755
Bva13g03492 174 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 2 173 - -
Bva13g03492 174 CDD cyclophilin_ABH_like 4 169 - -
Bva13g03492 174 SUPERFAMILY Cyclophilin-like 2 171 IPR029000 -
Bva13g03492 174 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 14 169 IPR002130 GO:0000413|GO:0003755
Bva13g03492 174 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 173 - -
Bva13g03492 174 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 55 72 IPR020892 GO:0003755|GO:0006457
Bva13g03492 174 PIRSF Peptidylpro_ismrse 1 174 IPR024936 GO:0003755
Bva13g03492 174 Gene3D - 1 174 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03492 Bva-Chr13 23756730 23758418 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03492 18 152 U-box Gene Family AT5G67530 51.471 2.29e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03492 K01802 - rcu:8268204 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03492 13 23756730 23758418 Bva13g03492 13 23756730 23758418 ECH