Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03477 ATGAGGATTATGATAAAGGGTGGTATTTGGAAAAACACCGAGGATGAAATCCTGAAGGCGGCTGTTATGAAATATGGTAAAAACCAGTGGGCTCGAATCTCTTCGCTTCTGGTTCGCAAATCCGCCAAACAATGTAAGGCTCGATGGTATGAGTGGCTTGATCCTTCTATTAAAAAGACTGAGTggacaagagaagaagatgagaAACTACTACATCTTGCTAAGCTTATGCCCACACAGTGGAGAACAATTGCTCCAATTGTAGGCCGTACCCCTTCTCAGTGCCTTGAGCGATATGAGAAGCTCCTTGATGCAGCCTGTGTAAAGGATGAGAACTATGAACCTGGTGATGACCCACGGAAATTGCGTCCTGGGGAAATTGATCCAAATCCAGAATCAAAACCTGCTCGACCAGATCCTGTTGATATGGATGAGGATGAGAAGGAAATGCTGTCCGAAGCACGGGCTCGGTTGGCTAACACTAAAGGCAAGAAGGCAAAAAGGAAAGCCAGGGAGAAACAGCTTGAGGAAGCCAGGAGGCTTGCTTCCTtgcaaaaaaagagagagctGAAAGCTGCTGGAATTGATATTAGGAAGCggaagaggaaaaggaaaggaatagACTACAATGCAGAAATTCCCTTTGAGAAAAGGCCTCCTCCAGGGTTTTTTGATGTTACTGATGAAGATAGACCAGTAGAACAGCCCAAGTTCCCTACTACAATTGAAGAACTTGAGGGAAAACGAAGAGTTGATGTGGAAGCACAATTAAGAAAGCAAGACAttgcaaagaataaaattgcaCAGAGGCAAGACGCTCCATCAGCTATACTTCAGGCCAACAAGCTGAATGATCCAGAAACTGTTAGAAAGAGGTCAAAACTGATGCTTCCTCCACCCCAGATTTCTGACCatgaattagaagaaattgcaAAGATGGGTTATGCTAGTGACCTTGCTGGGAGTGAAGAACTTACAGAAGGTAGTGGTGCAACACGTGCTCTTCTTGCTAATTATGCACAGACGCCTAGCCAGGGAATGACTCCTTTACGCACACCTCACAGAACACCAGCCAGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATTTGGCTAGGTTAAGAGAGTCTCAGACACCACTGTTAGGAGGAGAGAACCCAGAGCTGCATCCTTCAGATTTTTCTGGGGTAACTCCAAAGAGAAAGGAGATTCAGACTCCAAATCCCATGCTGACTCCCTCAGCAACCCCTGGAGTTGCAGGTCTTACTCCTAAAAGTGGTATGACACCAGCAAGGgatggtttttcttttggcatgACCCCAAAAGGAACTCCTCTCAGGGATGAGCTTCATATTAATGATATGGATGTGCATGACAGTACAAAACTTGAGCTAAAGAGGCAAGCTGATGTGAGAAGAAGTTTGAGCTCTGGTTTAAGCAATCTTCCACAACCCAAAAACGAGTACCAGATAGCTATGGAGCCAGTCATGGAAGATACTGAAGAACTTGAGGAGAAGATTGAAGAGGATATGTCTGATAGAATAGCTAGAGAAAAGGCTGAAGAAGAAGCACGGCAGCAAGCATTACTTAGAAAAAGATCAAAAGTACTCCAGAGGGAACTTCCAAGGCCTCCTGCTGAGTCATTGGAACTTATAAGAAATTCCTTGATGAGAGCTGATGTTGACAAAAGTTCCTTTGTTCCACCTACCTTTACTGAGCAAGCTGATGAGATGATAAGAAAGGAGCTTCTGACCTTATTGGAACATGATAGTGCTAAATATCCCCTAGACGACAAAGTGaataaggagaaaaagaaagggggcAAACGAACTGCAAATGGATCTGCTGCTGTCCCTATGATAGAAGATTTTGAGGAAGATGAGATGAAACATGCTGATCATTTGATAGAGGACGAGGTCCAGTATCTTTGTGTAGCAATGGGGCATGAAAGTGAACCGCTCGATGAATTTATTGAAGCACATAGAACTTGCCTTAATGATCTTACGTATTTTCCCACCCGTAATGCCTATGGTCTCTCAAGCGTTGCTATGAACACAGAGAAACTTGCTGCTTTGCAGAATGAATATGACATTGTCAGAAATAAACTGGATGATGGTAAGGAGAAAGTTGTACGCCTTGAGAAGAAGGTGACAGTTCTCACACAAGGCTACGAGATGCGGGCCAAAAAAGGTCTTTGGCCACAGATTGAGGCTACCTTTAAGCAGATGGACACTGCTGCAACAGAGCTAGAGTGCTTTCAAGTTTTGCAAAATCAGGAGCAACTGGCAGCATCACAccgaataaataatttatgggaTGAAGTACAGAAGCAAAAGGAGCTTGAGAAAACTTTACAGAAGAGGTATGGGGATCTTCTGACGGAGCTGGAAAGGATACAAATTCTCATGGACCAATACCGGGTACAGGCACAACAGCAAGAAGAAATTGCTGCGAACAATCGAGCTCTTGAGTTAGCTGAGGCTGCATCTAACCAAATTAGCACGGAGTGCGCAGATAATTATAAAGCTGTGACCACACCAGATGAGCTTGGAAGTGCCATGGCTGCTGGAACACCTCATGGTCAAACTGCTGATCAGCAAGTAGAAATTGTGCAACACCATACCTCTTCAACCCACAGACATGATATGGATGTTGATGGTGATATAGAACAAATGTCAGCGAATATTGGCCCAAAATTACCAGATTCTGGCTCTGCTGCTGAGGGTGACAATGCAACCATGGTAGAAGGTAATAATGCTCATGATCACACTGCTAATGGAGGGATCACTCATAATATGGGTGGTCTGGAGGATATAAGTAGTACTGAGGGAAATAAGGACGATGAAGATGCTGTGGACGCCGTAAACTTGCGAGATAGCAGTATACAGGAAACCACTGCTCCTGATGTGGGGGTTCAGACGGAAGCTGCTGATGGAGGAGAAAGGGTGAATTA 2954 0.4218 MRIMIKGGIWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRKRKRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRPVEQPKFPTTIEELEGKRRVDVEAQLRKQDIAKNKIAQRQDAPSAILQANKLNDPETVRKRSKLMLPPPQISDHELEEIAKMGYASDLAGSEELTEGSGATRALLANYAQTPSQGMTPLRTPHRTPASKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKRKEIQTPNPMLTPSATPGVAGLTPKSGMTPARDGFSFGMTPKGTPLRDELHINDMDVHDSTKLELKRQADVRRSLSSGLSNLPQPKNEYQIAMEPVMEDTEELEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPAESLELIRNSLMRADVDKSSFVPPTFTEQADEMIRKELLTLLEHDSAKYPLDDKVNKEKKKGGKRTANGSAAVPMIEDFEEDEMKHADHLIEDEVQYLCVAMGHESEPLDEFIEAHRTCLNDLTYFPTRNAYGLSSVAMNTEKLAALQNEYDIVRNKLDDGKEKVVRLEKKVTVLTQGYEMRAKKGLWPQIEATFKQMDTAATELECFQVLQNQEQLAASHRINNLWDEVQKQKELEKTLQKRYGDLLTELERIQILMDQYRVQAQQQEEIAANNRALELAEAASNQISTECADNYKAVTTPDELGSAMAAGTPHGQTADQQVEIVQHHTSSTHRHDMDVDGDIEQMSANIGPKLPDSGSAAEGDNATMVEGNNAHDHTANGGITHNMGGLEDISSTEGNKDDEDAVDAVNLRDSSIQETTAPDVGVQTEAADGGERVN 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03477 984 CDD SANT_CDC5_II 55 106 - -
Bva13g03477 984 MobiDBLite consensus disorder prediction 213 234 - -
Bva13g03477 984 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Bva13g03477 984 MobiDBLite consensus disorder prediction 399 413 - -
Bva13g03477 984 SMART sant 58 105 IPR001005 -
Bva13g03477 984 SMART sant 6 55 IPR001005 -
Bva13g03477 984 Gene3D - 5 59 - -
Bva13g03477 984 Coils Coil 796 816 - -
Bva13g03477 984 MobiDBLite consensus disorder prediction 380 435 - -
Bva13g03477 984 MobiDBLite consensus disorder prediction 893 984 - -
Bva13g03477 984 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Bva13g03477 984 Coils Coil 167 187 - -
Bva13g03477 984 MobiDBLite consensus disorder prediction 113 150 - -
Bva13g03477 984 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Bva13g03477 984 Pfam pre-mRNA splicing factor component 406 654 IPR021786 -
Bva13g03477 984 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 845 - -
Bva13g03477 984 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Bva13g03477 984 PANTHER - 1 845 - -
Bva13g03477 984 Coils Coil 689 716 - -
Bva13g03477 984 Gene3D - 60 114 - -
Bva13g03477 984 Coils Coil 984 984 - -
Bva13g03477 984 MobiDBLite consensus disorder prediction 941 955 - -
Bva13g03477 984 Pfam Myb-like DNA-binding domain 10 70 - -
Bva13g03477 984 CDD SANT 10 53 IPR001005 -
Bva13g03477 984 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03477 Bva-Chr13 23694719 23699946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03477 1 832 MYB-Related Transcription Factor Family AT1G09770 74.850 0.0 1218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva13g03477 Myb_Cef 9.1e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03477 K12860 - gmx:100790369 1430.23