Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03476 atGGCGAGGACTCCTTGCTGTGAGAAGATGGGATTGAAGAAGGGGCCGTGGACTCCCGAAGaagatcaaattttgatttcttatatTCAAAGATATGGCCATGGAAACTGGCGGGCGCTACCAAAACAAGCTGGTCTGTTAAGGTGTGGTAAGAGTTGCAGGCTTCGTTGGATAAATTACTTGAGGCCAGATATTAAACGAGGCAAGTTCAGcatggaagaagaagacaCCATCCTCAAGCTGCATCAAATTCTTGGAAATAGGTGGTCTGCTATTGCGGCACGATTACCAGGACGAACTgacaatgaaataaagaatttttggCATACCCACTTGAAGAAAAGGCTTCAAAGAAAGGAAGTAGGCACTGTTAATACAGCCACCTCCAGATGTCCCTTGCAACAGGGTCAAGTACCTTCTATTTCAGAAGCTCTGAATCTGAGGGCTATGCCTATGGAAAAGGTAGGTGTAAGAATGGGTGCAACAATTGCTGCTAATTCTGTTGTCAATGGGAATGCAAATGATGGTTTAGCATCAAGGAGGCATCTACCTATTGCAGATCAAGGATTTCAATGTGCAGTTGCGGTGTCTTCTGATGGGTCAGCTGGGCAAACCGTGGCTACTCAAAATTCCAGTCAGTTCAGCGAAGAAATGCAATTTTGGTACAATCTATTCATGAAAGCAGGACAGCCATCACGAGGCCACGGAGAGACACGATA 719 0.4242 MARTPCCEKMGLKKGPWTPEEDQILISYIQRYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSMEEEDTILKLHQILGNRWSAIAARLPGRTDNEIKNFWHTHLKKRLQRKEVGTVNTATSRCPLQQGQVPSISEALNLRAMPMEKVGVRMGATIAANSVVNGNANDGLASRRHLPIADQGFQCAVAVSSDGSAGQTVATQNSSQFSEEMQFWYNLFMKAGQPSRGHGETR 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03476 239 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva13g03476 239 CDD SANT 69 112 IPR001005 -
Bva13g03476 239 PANTHER MYB TRANSCRIPTION FACTOR 1 231 - -
Bva13g03476 239 CDD SANT 16 61 IPR001005 -
Bva13g03476 239 Gene3D - 68 132 - -
Bva13g03476 239 SMART sant 66 114 IPR001005 -
Bva13g03476 239 SMART sant 13 63 IPR001005 -
Bva13g03476 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva13g03476 239 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Bva13g03476 239 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 231 - -
Bva13g03476 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva13g03476 239 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva13g03476 239 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva13g03476 239 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bva13g03476 239 Gene3D - 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03476 Bva-Chr13 23692413 23693788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03476 1 225 MYB Transcription Factor Family AT2G31180 47.791 2.85e-78 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva13g03476 Myb_DNA-binding 1.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03476 K09422 - gmx:102663040 271.166