Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03470 ATGTCTTCATCGTTTCCTGTTCTTCCCACTCCTCTTGAAGACAAGTACATTAAACCCCCGGATTCTTTTCAGCTATCCAGTGTCCGAGCTCTCACTACAAATCCTGCTTCTGCGCAGGCTTCCCCATCAAATCCCAATGAAATCCCTATTTCCTCATTTTCAAAACATGATAGCAAAATTCGAGATTCTCCCTTTATAACTAGGACATTAGATCCATTTCAGGATCTTCTTAATTTTCCTGAAAATGTTTCCCTCCAGAATGATCATGTGAAAAGCAGTGCTTGTTACATACCAGATGACAATGCCAAAAAAGCTGATTTTGGGGAGTGGGTTGATCAACTAATCTCGGTTGATGATTCTCTGCACCCAAATTGGAGTCAACTTCTTGGAGATGATAATGTAGCAGATTCAAAATCAAAGGCGACCCAGGTTTCCGAGCCGCAGCATGTACCATCAGGAGAAGTTAATGCCCTTCCTAACTCAGTTTCCACTGCACCCCCAACTAAACCGAGAATGCGGTGGACACCGGAACTACACGAGGCTTTTGTCGAAGCAGTCAATCAACTTGGTGGTAGTGAGAAGGCTACTCCAAAGGGTGTCTTGAACCTCATGAAAGTTGAGGGCCTTACCATCTATCATGTGAAGAGCCATCTGCAGAAGTATAGAACTGCCAGATACAAACCTGAGTCATCAGAAGGAACTTCTGAGAAGAAGCTGACATCAATCGAGGAAATGAAATCTCTAGACTTGAAAACGAGTTTGGGGATCACTGAAACATTGCGATTGCAGATGGAACTCCAGAAACGGCTTCACGAACAACTTGAGATTCAAAGAAAGTtgcaaattgaaattgaaaaccaAGGGAAGCGTCTTCAAATGATGTTTGAGCAACGGAGGGAGATGGAAGATGGCAAGCTCAAGGCCCCCTCCTCCTTGGATGATCCCTCTGCTCCACCATCAAACACGGTGCCATCTTCCCCTCCTATTGACAATTTGGAAACCTCAAATGAGGGTCATACCACCAAATCTGGAATCACCAGTTGCACTGCAAAAACCATTTCCGGAGAAAGTTCCCTGGATGCAAGTGCGAAGCAAAAGGAAGATGAAAGTAAAAGTACAGATGAACATGTTCTAGGGGATGATCAGCTTGGTGCACCACCCACAAAACGGGCTAAGAGTGGACAATA 1187 0.4389 MSSSFPVLPTPLEDKYIKPPDSFQLSSVRALTTNPASAQASPSNPNEIPISSFSKHDSKIRDSPFITRTLDPFQDLLNFPENVSLQNDHVKSSACYIPDDNAKKADFGEWVDQLISVDDSLHPNWSQLLGDDNVADSKSKATQVSEPQHVPSGEVNALPNSVSTAPPTKPRMRWTPELHEAFVEAVNQLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQKYRTARYKPESSEGTSEKKLTSIEEMKSLDLKTSLGITETLRLQMELQKRLHEQLEIQRKLQIEIENQGKRLQMMFEQRREMEDGKLKAPSSLDDPSAPPSNTVPSSPPIDNLETSNEGHTTKSGITSCTAKTISGESSLDASAKQKEDESKSTDEHVLGDDQLGAPPTKRAKSGQ 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03470 395 Pfam MYB-CC type transfactor, LHEQLE motif 256 300 IPR025756 -
Bva13g03470 395 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 71 393 IPR044848 GO:0003700
Bva13g03470 395 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 71 393 - -
Bva13g03470 395 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 70 - -
Bva13g03470 395 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 169 223 IPR006447 GO:0003677
Bva13g03470 395 Pfam Myb-like DNA-binding domain 171 222 IPR001005 -
Bva13g03470 395 MobiDBLite consensus disorder prediction 326 360 - -
Bva13g03470 395 Gene3D - 168 227 - -
Bva13g03470 395 SUPERFAMILY Homeodomain-like 167 223 IPR009057 -
Bva13g03470 395 MobiDBLite consensus disorder prediction 361 378 - -
Bva13g03470 395 MobiDBLite consensus disorder prediction 136 168 - -
Bva13g03470 395 MobiDBLite consensus disorder prediction 28 55 - -
Bva13g03470 395 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 70 IPR044848 GO:0003700
Bva13g03470 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 167 226 IPR017930 -
Bva13g03470 395 MobiDBLite consensus disorder prediction 300 395 - -
Bva13g03470 395 MobiDBLite consensus disorder prediction 28 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03470 Bva-Chr13 23658455 23663579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03470 104 362 G2-like Transcription Factor Family AT3G04450 53.455 4.66e-78 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva13g03470 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03470 - - mtr:MTR_7g115530 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03470 13 23658455 23663579 Bva04g03396 04 27071105 27076122 ECH
Bva13g03470 13 23658455 23663579 Bva13g03470 13 23658455 23663579 ECH