Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03465 ATGGCTTCCAGCCTTTCCCCTATGACCTTTGATTGGCAAGGCCGTATGTGCCCATGTGTTGGCAAGAAATATACTGCACAATTGCTTTATGACAGACAGGGAATGGGGTTTGGTAGaaaaaagaaattgataaaactctCTAGCATCAGccttattcattttttcccACCTCTGAAAGATGCAATACAattgagaggaaagaaaagaagaagaaaaatgcaaacccacttcctcttcttctacTGTTACATTGgcctttctcttgtttttgctGAGGGAGCACAAGCTGCAGCCAGTGATGAGTTATCAACTCTACTCTCAATCAAATCTAGTCTCATTGATACAATGAATTATCTAAAGGATTGGAAACTACCAAGCAACGTGACAGAGAATGGTTCAAGTTCAGCCCATTGTAACTGGACAGGAGTTTGGTGCAACTCTGAAGGCTTCATAGAGAGACTAGATCTCTCCAACATGAATCTAAGTGGTGGTGTTTCAGACCACATTCAAGCCCTTTCCAGtctctcttttttcaactTAAGTTGTAATAATTTTGCTTCGTCATTTCCAAAATCACTGTCCAATCTCACTTCCTTGAAGAGCTTTGACGTGAGCCAGAACTACTTCACTGGCAGCTTTCCCACTGGTCTTGGAAGAGCGGCGGGATTGAGATCCATCAATGCATCAAACAATGACTTTCTGGGTTTTCTTCCAGAGGATCTTGGAAATGCAACATTGCTTGAAAGCCTTGATTTTCGAGGGGGCTACTTTCAAGGTACAGTTCCTACGAGTTTCAAGAATTTGCAAAAGCTCACATTTCTTGGCCTTTCAGGGAACAATTTTACAGGGAGTATTCCAGGACACCTTGGACAACTTGCTTCTCTACACACATTGATTCTAGGGTACAACGAATTTCAGGGTGAGATCCCTGCAGAGTTTGGCAACCTCACCAATCTTCAGTACCTAGACTTGGCTGTAGGCAATCTCAGTGGTCAGATTCCACCTCAATTGGGTAGGCTGCAAAAACTTACTACAGTTTATTTGTACCAGAACAAGTTGGAAGGAGAGGTTCCACCTGAAATTGGCAACATTACCTCACTGGAATTTTTGGACCTCTCTGATAATAACATTTTCGGGAAGATTCCAGAAGAGGTTGCCAAATTGAAGAGCCTGCGGCTCTTGAACTTAATGAGGAACAAGCTGATTGGTACTTTGCCAGACAAAATTGgtgatttgaaaaatttagagGTTCTTGAGCTGTGGAAAAACTCTTTACAAGGTCCTTTGCCAGTTAACCTTGGACAGAACTCCGCTTTGCAGTGGTTAGATGTGTCCTCTAACTCACTATCTGGTGAGATTCCTCCAGGTTTGTGTAACTCGGGCAATCTCACTAAACTAATCCTCTTTAACAATTCTTTCTCTGGTTCCATTCCAAAAGGTCTTTCAAATTGTTCATCTTTGGTTCGTGTTCGAATTCAGAACAATCTCATTTCTGGGACTATCCCGGTTGGCTTTGGAAACCTTCCAGGCCTTCAAAGGTTGGAATTGGCTAAGAACAATCTCACGGGCCAAATCCCAAAGGACATCACTTTGTCTAcatcaatttctttcattgatgttTCTTTAAACCATCTTGAATCATCTCTGCCTTCTGGAATTTTCTCTATTCCAACCCTTCAAACCTTCATTGCTTCCAACAACAAGTTGGAAGGCGACATTCCAGATGAGTTCCAAGGCTGCCCATCTCTCTCTGTATTGGATCTTTCAAGCAATCATATCTCTGGCAAAATCCCAGAAAGCATAGCTTCTTGTCAAAAGTTGGTGAATTTGAACCTCAGAAACAACCAGTTAACTGGGGAAATTCCAGAAGCAATCACAAACATGCTCACCTTAGCTCTTCTTGATCTGTCCAACAATTCCCTCACTGGCCGGATACCCCAAAACTTTGGTAATTCCCCTGCTCTGGAAATGGTCAACCTGTCTTACAATAAGCTTGAGGGTCCTTTACCTGCAAATGGGATTCTGGCGACCATAAATCTTAATGATCTTGCTGGCAATGCCGGTCTTTGTGGAGGCATTCTTCCTGCATGCTCACAGGAATTCACCATTACAAGCCAACAAAGGAGCTCGCACATCAAGCATATCACCGTTGGGTTTCTCACTGGGATTTCAGTGATCATATCTCTTGGCATGGCATCTTTTGCTGGTAGATTGTTATATAAAAGATGGTATTTGTATGACAGTTTTATCCATGATTGGTTCAGAAAGAGCAATGAAGAATGGCCTTGGAGATTAGTAGCATTCCAGAGGGTCAATTTCACTAGCACTGATATCCTAACTTGCGTCAAAGAATCAAATGTAATAGGCATGGGTGGCACAGGTATTGTTTACAAAGCTGAAATTCATAGACCGCATGTGACTGTAGCAGTGAAAAAGCTATGGAGAGCAAGAACAGACATAGAAGAcattaatgatatattagGAGAAGTGAACCTCCTAGGGAGACTCAAGCATAGGAACATCGTGAGACTGTTGGGATATCTTCACAATGAAAAGGATGTAATGATGGTATATGAATATATGCCCAATGGAAATCTAGGGACAGCATTACACGGTCAACAATCTGAAACATTGCTGTTGGACTGGGTTTCAAGGTACAACATAGCTCTTGGAGTAGCGCATGGGCTACATTATCTTCATCATGATTGTCATCCATCAATTATTCATAGGGATATCAAGTCTAATAACATACTCCTTGATGCAAATCTGGAGGCAAGGATTGCAGATTTTGGGTTGGCCAAGATGATGATCCACAAGAATGAAACAGTTTCAATGGTGGCTGGATCTTATGGATATATAGCTCCTGAATATGGTTATACACTTAAGGTGGACGAGAAGAGTGATATATACAGTTACGGAGTGGTACTTTTGGAGCTTCTGACTGGCAAGATGCCATTAGACCCTGCATTCGAAGAATCCGGATACATAGTTGAATGGGtaagaaataagagaagaaatggATGTTTGGAAGAAGCACTGGAGCCCATCATAGCCGGGCAGTGCAAACATGCCCAAGAAGAGATGCTTCTAGTACTCCGAATTGCACTTCTTTGTACTGCAAAGCTTCCGAAGGAAAGACCGTCCATGAGGGATATCATCACAATGCTTGGTGAGGCAAAGCCCAGAAGGAAAAGTGTTTGCCGTAACGGGGGACACGACGCTACCAAGGAAAAGCCAATATTCACACCTGCCTCAACCTTTCTCTA 3266 0.4029 MASSLSPMTFDWQGRMCPCVGKKYTAQLLYDRQGMGFGRKKKLIKLSSISLIHFFPPLKDAIQLRGKKRRRKMQTHFLFFYCYIGLSLVFAEGAQAAASDELSTLLSIKSSLIDTMNYLKDWKLPSNVTENGSSSAHCNWTGVWCNSEGFIERLDLSNMNLSGGVSDHIQALSSLSFFNLSCNNFASSFPKSLSNLTSLKSFDVSQNYFTGSFPTGLGRAAGLRSINASNNDFLGFLPEDLGNATLLESLDFRGGYFQGTVPTSFKNLQKLTFLGLSGNNFTGSIPGHLGQLASLHTLILGYNEFQGEIPAEFGNLTNLQYLDLAVGNLSGQIPPQLGRLQKLTTVYLYQNKLEGEVPPEIGNITSLEFLDLSDNNIFGKIPEEVAKLKSLRLLNLMRNKLIGTLPDKIGDLKNLEVLELWKNSLQGPLPVNLGQNSALQWLDVSSNSLSGEIPPGLCNSGNLTKLILFNNSFSGSIPKGLSNCSSLVRVRIQNNLISGTIPVGFGNLPGLQRLELAKNNLTGQIPKDITLSTSISFIDVSLNHLESSLPSGIFSIPTLQTFIASNNKLEGDIPDEFQGCPSLSVLDLSSNHISGKIPESIASCQKLVNLNLRNNQLTGEIPEAITNMLTLALLDLSNNSLTGRIPQNFGNSPALEMVNLSYNKLEGPLPANGILATINLNDLAGNAGLCGGILPACSQEFTITSQQRSSHIKHITVGFLTGISVIISLGMASFAGRLLYKRWYLYDSFIHDWFRKSNEEWPWRLVAFQRVNFTSTDILTCVKESNVIGMGGTGIVYKAEIHRPHVTVAVKKLWRARTDIEDINDILGEVNLLGRLKHRNIVRLLGYLHNEKDVMMVYEYMPNGNLGTALHGQQSETLLLDWVSRYNIALGVAHGLHYLHHDCHPSIIHRDIKSNNILLDANLEARIADFGLAKMMIHKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSYGVVLLELLTGKMPLDPAFEESGYIVEWVRNKRRNGCLEEALEPIIAGQCKHAQEEMLLVLRIALLCTAKLPKERPSMRDIITMLGEAKPRRKSVCRNGGHDATKEKPIFTPASTFL 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03465 1088 ProSitePatterns Protein kinases ATP-binding region signature. 788 812 IPR017441 GO:0005524
Bva13g03465 1088 ProSiteProfiles Leucine-rich repeat profile. 582 604 IPR001611 GO:0005515
Bva13g03465 1088 SMART serkin_6 782 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g03465 1088 Gene3D Ribonuclease Inhibitor 260 324 IPR032675 -
Bva13g03465 1088 Pfam Leucine rich repeat N-terminal domain 99 146 IPR013210 -
Bva13g03465 1088 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXL1 81 1073 - -
Bva13g03465 1088 SMART LRR_typ_2 316 340 IPR003591 -
Bva13g03465 1088 SMART LRR_typ_2 268 292 IPR003591 -
Bva13g03465 1088 SMART LRR_typ_2 172 196 IPR003591 -
Bva13g03465 1088 SMART LRR_typ_2 580 604 IPR003591 -
Bva13g03465 1088 SMART LRR_typ_2 412 436 IPR003591 -
Bva13g03465 1088 SMART LRR_typ_2 364 388 IPR003591 -
Bva13g03465 1088 SMART LRR_typ_2 437 460 IPR003591 -
Bva13g03465 1088 SMART LRR_typ_2 508 532 IPR003591 -
Bva13g03465 1088 SUPERFAMILY Protein kinase-like (PK-like) 776 1056 IPR011009 -
Bva13g03465 1088 SUPERFAMILY L domain-like 100 377 - -
Bva13g03465 1088 PANTHER UNNAMED PRODUCT 81 1073 - -
Bva13g03465 1088 Gene3D Ribonuclease Inhibitor 436 701 IPR032675 -
Bva13g03465 1088 Gene3D Transferase(Phosphotransferase) domain 1 865 1076 - -
Bva13g03465 1088 ProSiteProfiles Protein kinase domain profile. 782 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g03465 1088 Gene3D Ribonuclease Inhibitor 325 432 IPR032675 -
Bva13g03465 1088 Gene3D Ribonuclease Inhibitor 98 259 IPR032675 -
Bva13g03465 1088 Pfam Protein kinase domain 784 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g03465 1088 Gene3D Phosphorylase Kinase; domain 1 782 864 - -
Bva13g03465 1088 Pfam Leucine rich repeat 557 617 IPR001611 GO:0005515
Bva13g03465 1088 SUPERFAMILY RNI-like 309 662 - -
Bva13g03465 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 907 919 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03465 Bva-Chr13 23632402 23636570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03465 76 1081 Receptor kinase-like Gene Family AT1G08590 64.418 0.0 1289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva13g03465 Pkinase 5.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03465 - - gmx:100793873 1612.05