Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03462 ATGGGAACTCCAGTGAATATAATTGTAGGTTCGCATGTCTGGATTGAAGACGCAGATGTAGCTTGGATTGATGGACAGGTAGTAAAAATTACAGGGAAGGATGCTGAGATTGAAACTACCAATGGAAAGAAGGCGTctgcaaatttatcaaaaatatatccCAAAGATATGGAAGCTCCTCCTGGTGGAGTGGATGATATGACAAAGCTATCCTATCTGCACGAGCCTGGAGTCCTTCAGAACTTAAAAACTAGATATGaattgaatgaaatatatACTTATACTGGAAATATTCTTATTGCGATAAATCCATTCCAAAGATTACCTCATATTTATGATTCGCACATGATGCAACAATACAAGGGAGCACCATTTGGGGAATTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCATATAGGGCCATGATTAATGAAGGAAAAAGCAATTCAATTCTTGTCAGCGGGGAAAGTGGAGCTGGTAAAActgaaacaacaaaaatgcTCATGCAATACCTTGCTTTCTTAGGTGGTAGGTCTGGTACTGAAGGACGGACGGTTGAACAACAAGTTCTTGAATCAAACCCAGTTCTTGAAGCATTTGGCAATGCAAAAACTGTTAGAAACAACAATTCCAGCCGCTTCGGTAAATTTGTTGAGATCCAATTTGATAAACATGGGAGAATCTCAGGGGCAGCCATTCGAACTTACCTTCTTGAGAGGTCTCGGGTTTGCCAAGTTAATGATCCCGAACGCAACTATCACTGCTTTTATCTTCTTTGTTCTGCGCCACAGGAGGAAATTGAGAAATACAAATTAGGACATCCTAGCACTTTTCACTACCTTAACCAGTCAAAATGTTATGAACTGGTTGACACAAGTGATGCTCGTGAATATCTTGCCACAAGGAGAGCTATGGATATTGTTGGAATAAGCCAAAAAGATCAGGAAGCAATTTTCAGAGTTGTTGCTGCGATTCTTCATCTTGGTAACATTGCATTTACCAAAGGAAAGGAAGTTGACTCATCAGTTCCAAAAGATGGCCAAGCCAAGTTCCACCTGAAAACAAGTGCTGAGCTTCTCATGTGTGATGCTAATGCCTTGCAAGATGCGTTATGTAAGCGTGTCATGATCACCCCAGAAGAAGTTATTAAACGTAGTCTTGATCCCCAAAGTGCAGCTGTCAGCAGAGATGGCCTTgctaaaacaatttattctaGACTATTTGACTGGTTGGTGGATAAGATTAATAGTTCAATTGGACAAGATGCCAATTCAAAATGTTTGATTGGCGTCCTTGATATCTATGGTTTTGAAAGCTTTAAAACTAACAGTTTTGAGCAGTTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGCACGTGTTTAAGATGGAACAAGAAGAATATACAAAAGAGCAGATTAATTGGAGCTACATTGAATTTGTTGACAATCAAGATGTTCTGGACCTCATTGAAAAgaAACCTGGTGGAATCGTTGCTCTGCTCGATGAAGCTTGCATGTTTCCAAAGTCGACACATGAAACATTTTCAAACAAGCTTTATCAAACATTTAAGAGTCACAAACGCTTTATAAAGCCAAAACTGTCCCGAACGGATTTCACCATTGCTCATTATGCTGGGGAGGTCCTATACCAATCTGAtaaatttttggataaaaataagGATTATGTGGTTCCTGAACATCAAGATTTGTTGAGTGCTTCCAAATGTTCTTTTGTAGCTGGCCTTTTTCCTGTACTTCCAGATCAGTCATCTAATAAATCTGCTAAGTTTTCTTCTATTGGTTCTCGTTTTAAGCTACAACTACAGCAACTAATGGAGACACTAAACTCTACGGAGCCTCACTACGTTAGATGTGTAAAACCAAACAACCTCCTCAAGCCTGCAATATTTGAGAATGTCAACATCATGCAGCAACTTCGCTGTGGTGGTGTTTTAGAGGCAATTAGAATTAGTTGTGCTGGCTACCCTACTCGACGtactttctttgaattttctaaCCGATTTGGGCTCCTTGCCCCAGAGGCCATGGAAGGAAACTATGATGAAAAGGTTGTTTGCCAAAAGATTCTGGAAAAGGTCGGGCTTAAAGGATACCAGATTGGGAAAACGAAAATATTCCTCAGAGCAGGTCAGATGGCTGAACTAGATGCACGGAGAGCTCAAGTACTCAGTAATGCAGCCAAAACCATCCAACGGCGCATACGGACCCATCAAGCTCGTAAACATTATCTTGCATTGCGAGAGGTTACCATATTTGCGCAGTCTTTTTGCAGAGGGAGACTTTCATGCAAACTCTACGAGAACATGAGAAGGGAGGCAGCTGCTAAGAAAATTCAGAAGAACGCACGCAGATACGAAGCTAGGAAAGCCTATAAGAGACTCCAGGCATCAGCACTTGCCTTGCAAACAGGCTTAAGGGCAATAGCTGCTTGTAAAGAGTTCAGGTTTAGGAAGCAGACTAAAGCAGCCATTATTATTCAGGCTCGATGGCGATGCCACAAAGCTACCTCATATTACAAGAGGCTCAAGAAAGGTTCAATATATGCACAATGCAGATGGCGGGGGCGCGTGGCTAGGAGAGAACTCAGGAAACTCAAAATGGCTGCAAGAGAAACAGGTGCACTTcaagaagcaaaaaataaGCTTGAAAAACGCGTAGAGGAACTCACTTGGCGTCTCCAAttagaaaaaagtttaaggACGAATGTAGAAGAAGCCAAAGCACAAGAGGTGGCAAAAATGCAGAATTCACTGCAGGAGATGCAGAGCAAACTTGATGAAAGCAATGCTTTGCTTACTAAGGAGCGAGAAAATGCAAAGAAGATTGTCGAAGAAGCACCTCCTGTTATAAAAGAAACCGAGGTTATTGTAGAAGACACGCAAAAAATTGAGTCACTAACAGCAGAAGTTGAGAACCTAAAGACTTCACTCGAgtcagagaaagagaaagccgatgaatttgaaagaaaatacaaagaagCCCAAACTTATGGTGAAGAACGGCGCCAAAAATTAGAAGATACAGAGAAGAAGGTTCACCAGCTTCAAGAATCATTGACCAGGCTAGAAGAGAAGATTACTAATTTAGAGTCagaaaatcaagttctacGTCAGCAAGCTGTGTCCATGGCACCTAATAAGTTCCTTTCAGGACGCTCCAGATCTATTCTTCAGAGAGGTGATAGCGGTCACATTGGGGTGGAAGTAAAGGCAACTTTGGATCTACATAGCCCATCAATGAACCAGAGGGAATCCTCTGAAGTGGATGACAAGCCACAAAAGTCACTCAATGAGAAACAACAGGAGAATCAAGAGTTACTCATTAGATGTATTGCACAACATCTAGGCTTTGCTGGCAACAGACCAATTGCTGCCTGTATCATATACAAATGCCTCTTGCATTGGAGATCATTTGAAGTAGAGCGTACCAGTGTTTTTGATCGTATCATTCAAACTGTAGGACATGCCATTGAGACTCAGGATAACAATGATATCTTGGCTTATTGGTTATCCAATGCCTCCACACTTCTCTTGTTACTCCAGCGCACCCTTAAGGCAAGTGGTGCTGCTGGAATGGCTCCACAACGTCGTCGTTCCTCATCAGCTACCCTTTTTGGGAGGATGACacaaAGTTTCCGTGGAACTCCATCAGGAGTCAATCTTTCCCTAATCAATGGTAGCATGAGCGGGGGAGTACAGGTTGAAGCTAAGTACCCAGCTTTGCTTTTTAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGAATGATTCGAGATAATTTGAAGAAGGAAATTTCTCCCTTGCTCGCATTATGCATCCAGGCACCGAGAACATCCAGAGCAAGCTTGGTTAAGGGATCATCACGTTCAGTTGCAAACACCGAAGCGCAGCGAACTTTGATTGCTCACTGGCAGGGGATAGTTAAAAGCCTTGGGAACTTTTTGAATACTTTAAAAGCAAATCATGTTCCACCATTTTTAGTTCGCAAGGTGTTTAcgcaaattttttctttcatcaatgTTCAACTATTCAACAgTCTTCTATTAAGACGAGAGTGCTGCTCATTTAGTAATGGGGAATATGTCAAAGCCGGTTTGGCTGAATTGGAGCATTGGTGTTACAAGGCAACAGATGAGtacGCAGGTTCAGCCTGGGACGAACTCAAACATATAAGACAAGCTATTGGATTTCTGGTCATACATCagaaaccaaagaaaacaCTGGATGAAATAAGCCATGATCTGTGTCCAGTCCTCAGTATACAACAGCTTTATCGGATTAGCACCATGTACTGGGATGACAAGTATGGCACGCATAGTGTGTCCCCTGATGTCATATCCAATATGAGGGTGTTGATGACTGAAGATTCAAACAATGCAGTTAGTAGTTCGTTCCTGTTGGATGATGATTCAAGCATTCCATTTTCTGTGGATGACATATCAAAGTCAATGAAACAAATAGATATCTCTGATATTGAACCGCCACCGCTTATCCGGGAAAACTCTGGCTTTAGTTTCTTGTTGCCGCGGCCGGATTG 4580 0.3987 MGTPVNIIVGSHVWIEDADVAWIDGQVVKITGKDAEIETTNGKKASANLSKIYPKDMEAPPGGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDSHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMQYLAFLGGRSGTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCSAPQEEIEKYKLGHPSTFHYLNQSKCYELVDTSDAREYLATRRAMDIVGISQKDQEAIFRVVAAILHLGNIAFTKGKEVDSSVPKDGQAKFHLKTSAELLMCDANALQDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDKINSSIGQDANSKCLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFSNKLYQTFKSHKRFIKPKLSRTDFTIAHYAGEVLYQSDKFLDKNKDYVVPEHQDLLSASKCSFVAGLFPVLPDQSSNKSAKFSSIGSRFKLQLQQLMETLNSTEPHYVRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRTFFEFSNRFGLLAPEAMEGNYDEKVVCQKILEKVGLKGYQIGKTKIFLRAGQMAELDARRAQVLSNAAKTIQRRIRTHQARKHYLALREVTIFAQSFCRGRLSCKLYENMRREAAAKKIQKNARRYEARKAYKRLQASALALQTGLRAIAACKEFRFRKQTKAAIIIQARWRCHKATSYYKRLKKGSIYAQCRWRGRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQLEKSLRTNVEEAKAQEVAKMQNSLQEMQSKLDESNALLTKERENAKKIVEEAPPVIKETEVIVEDTQKIESLTAEVENLKTSLESEKEKADEFERKYKEAQTYGEERRQKLEDTEKKVHQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSILQRGDSGHIGVEVKATLDLHSPSMNQRESSEVDDKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTVGHAIETQDNNDILAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGTPSGVNLSLINGSMSGGVQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLALCIQAPRTSRASLVKGSSRSVANTEAQRTLIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSSSFLLDDDSSIPFSVDDISKSMKQIDISDIEPPPLIRENSGFSFLLPRPD 1526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03462 1526 Pfam IQ calmodulin-binding motif 738 756 IPR000048 GO:0005515
Bva13g03462 1526 Pfam IQ calmodulin-binding motif 786 805 IPR000048 GO:0005515
Bva13g03462 1526 Pfam IQ calmodulin-binding motif 833 853 IPR000048 GO:0005515
Bva13g03462 1526 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g03462 1526 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g03462 1526 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g03462 1526 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g03462 1526 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g03462 1526 SMART MYSc_2a 57 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g03462 1526 SMART iq_5 735 757 IPR000048 GO:0005515
Bva13g03462 1526 SMART iq_5 758 780 IPR000048 GO:0005515
Bva13g03462 1526 SMART iq_5 783 805 IPR000048 GO:0005515
Bva13g03462 1526 SMART iq_5 831 853 IPR000048 GO:0005515
Bva13g03462 1526 SMART iq_5 854 876 IPR000048 GO:0005515
Bva13g03462 1526 Pfam Myosin N-terminal SH3-like domain 9 45 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva13g03462 1526 Coils Coil 969 1052 - -
Bva13g03462 1526 Coils Coil 917 958 - -
Bva13g03462 1526 MobiDBLite consensus disorder prediction 1089 1112 - -
Bva13g03462 1526 MobiDBLite consensus disorder prediction 1096 1111 - -
Bva13g03462 1526 Coils Coil 878 912 - -
Bva13g03462 1526 Gene3D - 439 624 - -
Bva13g03462 1526 ProSiteProfiles IQ motif profile. 784 813 IPR000048 GO:0005515
Bva13g03462 1526 ProSiteProfiles IQ motif profile. 736 763 IPR000048 GO:0005515
Bva13g03462 1526 Gene3D Myosin VI head, motor domain, U50 subdomain 312 602 - -
Bva13g03462 1526 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 786 IPR027417 -
Bva13g03462 1526 Pfam DIL domain 1345 1448 IPR002710 -
Bva13g03462 1526 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 786 884 IPR027417 -
Bva13g03462 1526 PANTHER MYOSIN 6 1523 - -
Bva13g03462 1526 SMART DIL_2 1344 1451 IPR002710 -
Bva13g03462 1526 Gene3D - 252 310 - -
Bva13g03462 1526 Pfam Myosin head (motor domain) 64 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g03462 1526 CDD MYSc_Myo11 76 721 IPR036018 -
Bva13g03462 1526 ProSiteProfiles Myosin motor domain profile. 62 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g03462 1526 Gene3D - 668 734 - -
Bva13g03462 1526 Gene3D Kinesin motor domain 65 663 IPR036961 -
Bva13g03462 1526 ProSiteProfiles IQ motif profile. 855 884 IPR000048 GO:0005515
Bva13g03462 1526 CDD MyosinXI_CBD 1111 1492 IPR037975 GO:0007015
Bva13g03462 1526 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva13g03462 1526 ProSiteProfiles Dilute domain profile. 1160 1469 IPR002710 -
Bva13g03462 1526 PANTHER MYOSIN-9 6 1523 - -
Bva13g03462 1526 Gene3D - 786 833 - -
Bva13g03462 1526 Gene3D - 735 785 - -
Bva13g03462 1526 Gene3D - 834 883 - -
Bva13g03462 1526 ProSiteProfiles IQ motif profile. 832 859 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03462 Bva-Chr13 23601422 23613642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03462 1 1526 Myosins gene family AT1G54560 83.563 0.0 2704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03462 K10357 - gmx:100816792 2708.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02712 04 23684888 23698586 Bva13g03462 13 23601422 23613642 BWGD
Bva13g03462 13 23601422 23613642 Bva13g03462 13 23601422 23613642 ECH