Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03434 ATGGATCAGTTTCCTTCTAATTTGTTGCCTGATCAAGCAAGCCCAGATTGGATGAACAAAGGGGACAATGCGTGGCAACTAACGGCAGCTACGGTGGTGGGCCTGCAGAGTATCCCTGGACTTGTGATCCTTTACGGAAGTGTTGTGAAGAAGAAATGGGCAGTCAACTCCGCCTTCATGGCCTTTTATGCGTTTGCGGCCGTTCTCTTTTGCTGGGTTGCCTGGGGTTTCCGCATGTCCTTTGgagaaaaacttatttttttcttgggaaaACCGGCAGTGGCATTGGACGAGAAATTCCTTTTGGGGCAAGCATTTCTCGGCTACTTCCCCACTGCTACAATGGTATTTTTTCAGGGTGTCTTTGCTGGGATTACCTTGATTTTGATAGCTGGTTCCTTACTGGGGAGGATGAACATTCGTGCATGGATGTTGTTTGTCCCATTATGGCTTACATTTTCATACACTGTCGCTGCCTTTAGCATTTGGTGCCCGGATGGATGGTTAGCCAAGCTGCGAGTCATTGACTTCTCGGGGGGTTATGTCATTCACCTTTCGGCCGGAGTTGCTGGTTTCACTGCAGCTTATTGGGTGGGTCCGAGATCTGACTTGGACAAAGAAATGTTCCCCGAAGCTAACAACATGATCATGGTACTTGCCGGTGCGGGGTTGCTTTGGATGGGGTGGAGTGGTTTCAACGGTGGCGGTCCATTCTCCGCGAGCACGCTTGCATCTCTAGCCGTGCTTAACACGCACGTGTGTGCAGCCACCAGCATCCTAACCTGGATCGCGCTGGACACCTTCTACCTCGGCAGGCCCAGCGTGTTTGGCGCCGTGCAGGGCATGATCACCGGACTCGTTTGCATTACGCCAGGCGCAGGAGTTGTACAAGGCTGGGCAGCCATCATAATGGGTGTCATCTCCGGAAGCATTCCTTGGTACACAATGATGGTACTCCACAACAAGCTCAgcattttaaaacaaatcgACGATCCCATGGCCATCTTCCACACTCATGCCATTGCCGGAGCTCTTGGTGCAATTCTAACTGGCTTCTTTGCCGTGCCTAAACTTTGCCGTCTTTTTTACGATGTGCAGGGAATTGAATACATAGGCTTAGCCTATGCACTTCAAAATGGCACAACTCGGGCGGGTTTAAGACAAATGGGCATTCAAATGGCTGCTATTGTTTTCGTGACTTGCTTCAACGTTGTTATGACGACCTTCATTTGCTTGTTTGTGCGAACCATTGTGCCACTTAGGCTAGATGAGGATGCACTAATAATTGGTGACAAGGCAGTACACGGAGAGGAAGCTTTTGCGTTGTGGGCTAGTTTCCACAACTTTAAGCCCAATAAATGTTATGATGCTCAAGACATATCATCCGTTGTTGGGTCACGGTCAATGAGGGAACTTCAAATGGTATA 1427 0.4821 MDQFPSNLLPDQASPDWMNKGDNAWQLTAATVVGLQSIPGLVILYGSVVKKKWAVNSAFMAFYAFAAVLFCWVAWGFRMSFGEKLIFFLGKPAVALDEKFLLGQAFLGYFPTATMVFFQGVFAGITLILIAGSLLGRMNIRAWMLFVPLWLTFSYTVAAFSIWCPDGWLAKLRVIDFSGGYVIHLSAGVAGFTAAYWVGPRSDLDKEMFPEANNMIMVLAGAGLLWMGWSGFNGGGPFSASTLASLAVLNTHVCAATSILTWIALDTFYLGRPSVFGAVQGMITGLVCITPGAGVVQGWAAIIMGVISGSIPWYTMMVLHNKLSILKQIDDPMAIFHTHAIAGALGAILTGFFAVPKLCRLFYDVQGIEYIGLAYALQNGTTRAGLRQMGIQMAAIVFVTCFNVVMTTFICLFVRTIVPLRLDEDALIIGDKAVHGEEAFALWASFHNFKPNKCYDAQDISSVVGSRSMRELQMV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03434 475 Pfam Ammonium Transporter Family 24 439 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bva13g03434 475 TIGRFAM amt: ammonium transporter 22 439 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bva13g03434 475 SUPERFAMILY Ammonium transporter 17 422 - -
Bva13g03434 475 ProSitePatterns Ammonium transporters signature. 176 201 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bva13g03434 475 PRINTS Rhesus blood group protein signature 302 320 IPR002229 GO:0005887
Bva13g03434 475 PRINTS Rhesus blood group protein signature 216 234 IPR002229 GO:0005887
Bva13g03434 475 PRINTS Rhesus blood group protein signature 119 135 IPR002229 GO:0005887
Bva13g03434 475 PRINTS Rhesus blood group protein signature 247 269 IPR002229 GO:0005887
Bva13g03434 475 Gene3D Ammonium transporter AmtB like domains 7 446 IPR029020 -
Bva13g03434 475 PANTHER AMMONIUM TRANSPORTER MEP2 4 475 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bva13g03434 475 PANTHER AMMONIUM TRANSPORTER 4 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03434 Bva-Chr13 23477010 23478658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03434 113 453 Inorganic Solute Cotransporters AT2G38290 56.012 1.35e-125 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03434 K03320 - gmx:100782944 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03434 13 23477010 23478658 Bva13g03434 13 23477010 23478658 ECH