Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03423 atGTTCGATGGAGGAGTACCTGAGCAGTTCCAGCAATTCATTGCAACTAGAACCTCACTTCCTCTTCACCTATCATTTCCTCTCCATTCTGCCTCTGCAACTGCAACTTCACCTTCAACCCCTAATACTAATTTCCAATCTCTTTTTGCTGATTCTTATAATAGCCACGCCCATCCTTCtcgtcatcatcatcaacatcaCTTGCCACTCCAACCCAATCTCTTGCACCAGCCGTCTCCAACCCGCAAAGATGAAGACAAGCAAGATAATTGCACTATGAACTTCGGGGATgttgaaagagaaagacaaTTAGCTGATGAGTTGATTGATAACTCCTGGACTAATGATGAAGTGCTTGCGCTTTTGAGGATCAGATCTAGCATGGAAACTTGGTTCCCAGACATCACTTGGGAAAATGTCTCAAGGAAGCTAGCAGAGCTTGGATTTAAGAGGACTGCCGAGAAGTGTAAGGAGAAGTTTGAAGAGGAAAGTAGGTGCTTCAACAACATTAATTACAGCAAGAGTTACCGGTTTCTAAGTGAGCTTGAAGAGCTTTATCATGgtgatcatcatcatcaaaacGCTGAGGTTGAGATTGGGACAGAAAAGACCCAACAGATGGAAAAGCCAACTGAGGTTGATCGGGGACAAGACAAGAATAACATGGGCCATCCGACATTGGAAGACGATTCAAGAAATGACCCATCGGTGGGGAAACATAATATTGATCATGAAAGTGAAAAAGTTTCTCTGGAAAAATCAAAggacagaaagagaaagaggcaAGACAAATTCGAGATGTTCAAGGGTTTCTGTGAAAATATTGTCAACAAGATGATGGCTCAACAAGAAGAGATGCACAATAAGCTTCTTCAAGATATGCTCAAAAGGGATGAAGACAAGTTTGCTAGAGAGGAAGCTTGGAAGAAGCGAGAGATGGATAGGATGAACAAGGAGCTTGAATTGATGGCCCAAGAGCAAGCTATTGCAGGTGATAGGCAAGCCACCATTATCGAATTCTTGAAAAAATTCGCAGCAAGTTCTCCAACTGCAAACCAAAACGAAAATGCAAAGAACCTCAAGGTAACAAACACTTCAAATCCCACTACTCCCGTTTCTTCCAATTCCCGCCACCTGCACCCGCAAAACCCTAGTAGGAAAAATGACCTTGGCTCACCGCCTTCATCCACTATGATTGATCCAAATGATCAAAATACCTGTACTTTCCCTACCCAGAAGAATTCAGCTTTACCCATTACGTGCAGTACTGCAGAAAACCCTAGCTCAAGTCTTGCCCCAGAAACTACAGAAGTGGCTTCTTCATCTACTTCGACCCCAGCTGCTCCCCAGAATAATAATTCATTGGTAACAACAACCGCTTCAGTTTCAGCATATAGTGCCTCATCGAACATTATGCATATGTCCAGCGGTGAGAAAGAAGACGTTCGAAGAAGATGGCCAAGAGATGAAGTGTTAGCGCTAATAAACCTGAGGTGCAGCCTTAATAACAACGACGAAGACAACAAGGATGTCGGAAGCAAAGCTCCTTTATGGGAGAGAATCTCTCGAGGGATGTTGGAGTTGGGATACAAGAGAAGTGCAAAGAGGTGCAAAGAGAAATGGGAGAATATAAACAAGTATTTCAGAAAAACAAAGGATAACGTTAATAAGAAAAGGTCCCTTGATTCTAGGACTTGTCCTTATTTCCATCAGCTAAGTACTTTGTATAGTCAAGGAAAACTTGCTTCGCAACAAGAAAGTCTAGATCAAAATCATCACTTGAATCCACCACCGACAAGTCACCGGCAAGTGCCGCAAGAAACCCAAGCTCAGTCTTCTCGTCAAGTGGGATCTAGTTGTTTCAGTACTATGCATGTGGATGGAAGCGAGAAAACTTTGATGCAGGAGGGGTA 1913 0.4135 MFDGGVPEQFQQFIATRTSLPLHLSFPLHSASATATSPSTPNTNFQSLFADSYNSHAHPSRHHHQHHLPLQPNLLHQPSPTRKDEDKQDNCTMNFGDVERERQLADELIDNSWTNDEVLALLRIRSSMETWFPDITWENVSRKLAELGFKRTAEKCKEKFEEESRCFNNINYSKSYRFLSELEELYHGDHHHQNAEVEIGTEKTQQMEKPTEVDRGQDKNNMGHPTLEDDSRNDPSVGKHNIDHESEKVSLEKSKDRKRKRQDKFEMFKGFCENIVNKMMAQQEEMHNKLLQDMLKRDEDKFAREEAWKKREMDRMNKELELMAQEQAIAGDRQATIIEFLKKFAASSPTANQNENAKNLKVTNTSNPTTPVSSNSRHLHPQNPSRKNDLGSPPSSTMIDPNDQNTCTFPTQKNSALPITCSTAENPSSSLAPETTEVASSSTSTPAAPQNNNSLVTTTASVSAYSASSNIMHMSSGEKEDVRRRWPRDEVLALINLRCSLNNNDEDNKDVGSKAPLWERISRGMLELGYKRSAKRCKEKWENINKYFRKTKDNVNKKRSLDSRTCPYFHQLSTLYSQGKLASQQESLDQNHHLNPPPTSHRQVPQETQAQSSRQVGSSCFSTMHVDGSEKTLMQEG 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03423 637 MobiDBLite consensus disorder prediction 197 260 - -
Bva13g03423 637 MobiDBLite consensus disorder prediction 582 637 - -
Bva13g03423 637 CDD GT1 484 552 - -
Bva13g03423 637 MobiDBLite consensus disorder prediction 348 402 - -
Bva13g03423 637 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 14 632 - -
Bva13g03423 637 Gene3D - 113 168 - -
Bva13g03423 637 Gene3D - 486 550 - -
Bva13g03423 637 MobiDBLite consensus disorder prediction 420 453 - -
Bva13g03423 637 PANTHER - 14 632 - -
Bva13g03423 637 Pfam Myb/SANT-like DNA-binding domain 483 574 IPR044822 -
Bva13g03423 637 Pfam Myb/SANT-like DNA-binding domain 111 173 IPR044822 -
Bva13g03423 637 ProSiteProfiles Myb-like domain profile. 105 164 IPR001005 -
Bva13g03423 637 MobiDBLite consensus disorder prediction 54 90 - -
Bva13g03423 637 ProSiteProfiles Myb-like domain profile. 478 545 IPR001005 -
Bva13g03423 637 SMART sant 482 547 IPR001005 -
Bva13g03423 637 SMART sant 109 166 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03423 Bva-Chr13 23427700 23430831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03423 1 578 Trihelix Transcription Factor Family AT5G28300 39.028 1.78e-102 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva13g03423 Myb_DNA-bind_4 1.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03423 - - qsu:112024754 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03423 13 23427700 23430831 Bva13g03423 13 23427700 23430831 ECH