Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03411 ATGAATGGTGTCACGCACCTTGAACCCGATTACTCTGAGTTTGTTGAAGTTGATCCAACTGGCAGATATGGCAGATACAATGAAATTCTAGGCAAAGGAGCTTCAAAGACAGTTTATAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAACTGTATGATTTCCTGCAAAGCCCTGAAGATCTCGAGAGGCTTTACTGTGAAATTCACCTCCTGAAAACATTGAAGCACAAAaacattatgaaattttatacttCTTGGGTGGATACTGCAAATAGGAATATCAACTTCGTGACTGAAATGTTCACTTCTGGTACTCTCAGACAGTATAGGCTAAAGCACAGGAGAGTTAACATCAGAGCTGTGAAGCATTGGTGTAGACAGATCCTGAAAGGACTTCTCTATCTTCATAGCCACGACCCACCAGTGATCCACAGAGATCTCAAATGTgataatatctttattaatgGAAACCAAGGCGAAGTGAAGATCGGCGACCTTGGTTTAGCAGCAATTCTTCGGAAATCCCATACTGCTCATTGTGTCGgAACGCCTGAGTTCATGGCCCCAGAAGTGTATGAAGAGGCATATAATGAATTAGTTGACATATATTCCTTTGGAATGTGCATATTAGAAATGGTCACGTTTGAATATCCTTACAGTGAATGCACTCATCCAGCACAAATCTACAAGAAAGTTATTTCTGGGAAAAAGCCAGATGCTTTATATAAAGTAGAGGATCCAGAAGTGCGACAATTTGTTGAGAAATGCTTGGCAACAGTGTCTTTAAGGCTCTCAGCAAGGGAGCTTCTAGATGACCCTTTTCTCCAGATTGATAATTATGAATATGAGTTGAGGCCAGCAAACAGCATCAAATCAGATGATTTCAGTCCTCTCATCAGGCAACCATACTTCGATCTTCAGAGAAGTTATAGTAACTTGAGTACCGAATACTCAAATGGTTTTGGGCATGAAGGCCTTGGAGATTGGTATTCTCATCCAGCTGAAATTGAACCAAGTGGCATTGAACTTTTCGATTACCACGATGATGAACACTCTGAAGATGTTGATATAAGCATCAAGGGCAAGAGGAAAGATGATGGTGGCATCTTTCTAAGACTAAGAATTGCAGATAAAGAAGGTCGTATTCgaaatatttatttccctTTTGACATAGAGACAGACACAGCATTAAGTGTAGCTACGGAGATGGTTGCAGAACTCGACATAACTGATCAGGATGTAACCAGAATAGCAGATATGATAGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAGGCCAGGACCAGTAATTGAGGAAACTCCCCGATTCGCCAATCTAAGTTTCTGTCAAAACTGTGCTTCAAATCATACTTCCAGTGGCTCCCTCATGGATTTTCTTTCACGTGGTTCAGGCGCCAAGAACTTGCAACTTCTTCAATGCTGTAAGAATGGATGTGCTTCAATGCATGGTCGATTCGAGGAGATTACATTCCAATCTGAGGATTATGATAATCATGTTAGAGAAAATGCACCTAATATATCAAGCCAACCAGACTGCTTGCAGTATCAGGGATTATGGAATCAGCATGAAAGTCGAGAACTTAGCCCAGTAGACTCTGAACAAAGTCATTCAGAGGAACAATCAGATAAACCCGCATCAGCTGAAGAAGATAAGGAGCAGGATTTCTGCGAAAACAAGTTCACTCCGAAACCAGGAAATTCCCTACCAAATTTATCAGGAACCCATTACTTTTCTGCAGTTCGTTCGCTATATTGTGACCTTGAGGACACGTATGAGAAAGAGATCCAACAGGAATTGAGATGGCTCAGAGCAAAATACCAGATGGAGTTAAGAGATGTTAAGGATCACCAGTTTCGGCTAACAGCAAAATCGTCACAAGGTAGTCACAGAAAGAACGAAGAGAAAAATGACATTTTGTTACATTCACCGACAAACACTCTAGAGGGAAGCAACAATGGGATTCACTTGGAAAACTTTGCCAATAGTGGGAATTGTAGTTCTAGCTGCCATTCTCATGTCAAAAAGAGCTGCCCCAATTCGGACACCCAAAAGGCCCGAAATTGTGAGGCGATGGATTCCCCAGAAGGTATCACTGCCACAAAGAACTGTTACTCAGGGTCACTGCTTCCACATCCCTTATACAGAGCAGTTTCCCTCCCAGTTGATGCTGttgatatatg 2222 0.4095 MNGVTHLEPDYSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILKGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHTAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVEDPEVRQFVEKCLATVSLRLSARELLDDPFLQIDNYEYELRPANSIKSDDFSPLIRQPYFDLQRSYSNLSTEYSNGFGHEGLGDWYSHPAEIEPSGIELFDYHDDEHSEDVDISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIETDTALSVATEMVAELDITDQDVTRIADMIDGEIASLVPEWRPGPVIEETPRFANLSFCQNCASNHTSSGSLMDFLSRGSGAKNLQLLQCCKNGCASMHGRFEEITFQSEDYDNHVRENAPNISSQPDCLQYQGLWNQHESRELSPVDSEQSHSEEQSDKPASAEEDKEQDFCENKFTPKPGNSLPNLSGTHYFSAVRSLYCDLEDTYEKEIQQELRWLRAKYQMELRDVKDHQFRLTAKSSQGSHRKNEEKNDILLHSPTNTLEGSNNGIHLENFANSGNCSSSCHSHVKKSCPNSDTQKARNCEAMDSPEGITATKNCYSGSLLPHPLYRAVSLPVDAVDI 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03411 740 Gene3D - 373 439 - -
Bva13g03411 740 CDD STKc_WNK 22 281 - -
Bva13g03411 740 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Bva13g03411 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Bva13g03411 740 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g03411 740 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 729 - -
Bva13g03411 740 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g03411 740 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g03411 740 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 376 430 IPR024678 GO:0004674|GO:0005524
Bva13g03411 740 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Bva13g03411 740 MobiDBLite consensus disorder prediction 540 572 - -
Bva13g03411 740 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Bva13g03411 740 MobiDBLite consensus disorder prediction 538 584 - -
Bva13g03411 740 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03411 Bva-Chr13 23375726 23379324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03411 127 739 MAP Kinase Kinase Kinase AT3G04910 53.917 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bva13g03411 Pkinase 4.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03411 K08867 - gmx:100272198 1199.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03411 13 23375726 23379324 Bva13g03411 13 23375726 23379324 ECH