Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03408 ATGGCGTCAGAGCAAGACGACACCGTTTTTCCTGAAGAAGACATCGACGACGACGATGAAGAATCTCAGGAGGACGAAGACGACGAGGACGACGACGACGTTTTAGGTGAAGCCGTGGACGATGAAGAGAACGAAGTTTCTCCTTCCAACTCATCCGCTCTTGCTGTCGCCGGCGTTTCTGCCGCCGCCGTTACAGTCGCCGTGCCGAGTTCAGGTATCTCAAACGGAGAGAACACCCCAATTTCGGCAGCCACCGCGACTACAATTGTTGTCTCTGATTCCTCCGATCCGAAACAGCAGCGAATTGAACAAAGCGAAGAGAAAAAGCCTTTGGACGATTCACGGAGACTATTTCAGCGTCTTTGGACTAACGAGGATGAGATCGAGCTTCTGCAGGGTTTCCTTGACTACACGACACAACGAGGGTCCTCCCATCACAACGATACGGCTCTGTTCTACGATCAAATCAAGTCCAAACTTCAGCTCGATTTCAACAAGAACCAGCTTGTTGAGAAGCTCCGAAGGTTGAAGAAGAAGTACCGGAATGTCTTGAACAAGATTAGCTCAGGTAAAGAATTCTCGTTCAAAAGCCCTCATGATCAGGCCACCTTTGAAATTTCTCGCAAGATCTGGAGCAGTATGGGTCAAATTGGCGGTGCCGTTGAGGACAATGCGCTGGAAGACGATGAAATCAACCCTAAccctaatcctaattttaatCACTCAATTGTGAAGAATGAGGTAATTATGGGAAATTCTGCGGAGAAGAGAACCCCGTCATCACGGAAACGGTCACGCTCTCGATCAGGGATGAGAAGCGATGAGAAGAATGATGGGTTAGCGTCAAACAAAGATTATAATTGTATTAGTAATACTAATAGTAatcataacaataacaatagcATTCCCAGTGTGATTGAGGAGACTATGAGAAGTTGTTTATCGCCATTATTCAAGGATCTGATGACTGGTGCCATAGGCGGCCCGTTTGGGGCGAGAGGGTTTGGAGGATTGGCACTGAATCCTTTGCCACTCAGTTTCGGGGGGCCGTCCATGTTCAATTTCGGAAGTGGAGAAGTGATGGATGAGAAATGGAGGAAGCAACAGATTTTGGAGTTGGAGGTTTACTCCAAGAGATTGGAGCTTGTGCAGGATCAGATCAAGGCTGCTCTGGAGGAATTGCGCTCAAATGGAGGATA 1199 0.4662 MASEQDDTVFPEEDIDDDDEESQEDEDDEDDDDVLGEAVDDEENEVSPSNSSALAVAGVSAAAVTVAVPSSGISNGENTPISAATATTIVVSDSSDPKQQRIEQSEEKKPLDDSRRLFQRLWTNEDEIELLQGFLDYTTQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKISSGKEFSFKSPHDQATFEISRKIWSSMGQIGGAVEDNALEDDEINPNPNPNFNHSIVKNEVIMGNSAEKRTPSSRKRSRSRSGMRSDEKNDGLASNKDYNCISNTNSNHNNNNSIPSVIEETMRSCLSPLFKDLMTGAIGGPFGARGFGGLALNPLPLSFGGPSMFNFGSGEVMDEKWRKQQILELEVYSKRLELVQDQIKAALEELRSNGG 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03408 399 PANTHER BNAANNG10740D PROTEIN-RELATED 1 398 IPR007592 GO:0006355
Bva13g03408 399 MobiDBLite consensus disorder prediction 99 113 - -
Bva13g03408 399 MobiDBLite consensus disorder prediction 250 302 - -
Bva13g03408 399 Coils Coil 166 186 - -
Bva13g03408 399 Coils Coil 373 397 - -
Bva13g03408 399 MobiDBLite consensus disorder prediction 283 302 - -
Bva13g03408 399 Pfam Protein of unknown function, DUF573 118 212 IPR007592 GO:0006355
Bva13g03408 399 MobiDBLite consensus disorder prediction 1 59 - -
Bva13g03408 399 MobiDBLite consensus disorder prediction 90 113 - -
Bva13g03408 399 MobiDBLite consensus disorder prediction 1 44 - -
Bva13g03408 399 PANTHER BNAANNG10740D PROTEIN 1 398 - -
Bva13g03408 399 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03408 Bva-Chr13 23361958 23363545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03408 1 399 GeBP Transcription Factor Family AT5G28040 45.249 1.01e-98 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Bva13g03408 DUF573 9.7e-35 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03408 - - gmx:100779712 414.461