Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03400 ATGAAgaacattttcaaaaaactTCATATAGGGAGCAATCACGACCCTAATCGATCGAATGAAACCCCAACCTCCGTAGCATCACCATCGTGCGACTTCGATCACCGCACAGCTCCGGTTCATAACTCCATCACGCCTCTGGCTAGTCCGTCATCATCGTCGCCGTCTTCAGCTACTGTGTCGACCGGTGGAGTTTCCAACTCAGCGCCCGCTACAGTCAATCGACAAGACTATTTTTCATCAGAGGAGGAGTTTCAGGTTCAGCTAGCCCTAGCTATCAGCGCATCTAATTCGGAGTTCCGGGAAGATCCTGATAAGGATCAGATCCGAACAGCAACACTTCTGAGTTTGGGAGGTCATCGAATTGATTCCACAAGGAGTAAGGATGAAGTGGCGGAGGCGCTGTCTAGGCAATACTGGGAATACAGTGTGCTTGATTATGAGGAGAAAGTACTGGATGGTTTTTATGATGTATATGGGCTCTCTACTGATTCAGCAATGCAAGGGAAGATGCCATCTTTGACTGACCTTGAAGCTAACCCTGGAAATTCCAGCTTTGAAGTTGTCATAGTTAATCGGACGATTGATCCTGCCTTAGAAGAGCTGGTGCAAGTAGCACACTGTATTGCATTAGACTGCCCTGTCACTGAAGTTGATGTTCGGGTACAAAGATTTGCTGAACTTGTTACAGGGCATATGGGTGGTCCTGTAAAGGATGCCAATATTATATTAGCAAGATGGATGGAAAGAAGTACAGAGCTAAGGACATCTCTTCACACAAGTGTTTTACCTCTTGGGTCCATAAACATTGGCCTCTCTAGGCACCGTGCTTTGCTTTTCAAGGTATTAGCTGACAGTATCAACATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTTGAGGATGACGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCTGGAACACTTATCCCAGCTGATATTTTAAGCGCAAAGGATACTGCCCTTAAGTCGTGCAATCCCAAGATTTTACCAAGTCTTCAATCTGCTAGGGAAACTGGATATTCTTACTCAAGACCAATGGAATCTCATGGTGAAGGCAGTAGTCAAAATTCTGGTATAAGAGGTGGTTTCCCACCATCAAATggaaaaacatattttgaaaattccgGATTCCTGTCTTCAAACTTGCCTTCAAGTACTGACGTTGGTGTTGGTCCTTCTAAAATACCTAACAGAGTGACTACTAGTCAATTGGAAAATTTCCCCCCTTCAGCTGGTCCTTCCTTGTACAAAGGGACTCGTGGAATGAATGCAGTTGGTGATGCGACAAGACTAAATGTCAATGTTGTACCTTACGAACAGAATAGCCCAGATGACACTAAGAATCTTTTTGCAGATCTTAACCCATTTCAGATAAAAGGAACTGGCAAGAATTCTCTGCTTAATAAGCCTGTGGAAAATAAAGTTCCAGAGCTTCAGAGTACGAGAAACAATACGGCTTCTGGTCGACCCCCAGTACCACTGATGTGGAAGAATCGTTATGCTTACAATGAAGTCCCAAGGAAAATTAATCGTGATCCTAATGAATACAACCCGTCTTTGTTGGGTTTCAATAGTTCTTCCATATCTGAAAAGATGGATCTAAATGATTCCATATCATCACACAACCCAAATATAAGTAGAGGTAGAGGTACTCAAAATTTGACACAAGCTACTGATTCAATATCAGCATCTGGTAAAGATGTGAACAGGGTTGAGGATCTCAATGCTGATTGTAAAAATGGTAATATGGTGAGTTTACATAATGACATGGTAGATGTGGCTagagaacaagaaaacaatgaaattggATTTCTTGAGCGGAGAAAGTGCACTCATGACAGGTTCATGGGAagcaatttgaaattaaaagatcCAGAGAGTCCTAGCTCGTCAATTGATTCTATTGCAAATAGGGTTGATCAAATATTTGATGACGTAGATGTCGGTGAATGTGAAATTCCATGGGAGGATCTGGTTCTTGGTGAAAGAATTGGTCTAGGTTCATATGGCGAGGTTTACCATGCAGACTGGAATGGCACAGAGGTCGCTGTGAAGAAATTTTTGGATCAGGATTTCTCAGGTGCTGCCTTGGCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGCTGCGCCATCCAAATGTTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCTAATCTCTCAATCATTACAGAGTTTCTTCCAGGAGGGAGCTTGTATAGGATTCTTCATCGTCCTAATTGTCAGATTGATGAGAAACGTAGGATAAAAATGGCTATGGATGTGGCAAGGGGCATGAATTGCTTACACACCAGCACACCTACAATTGTTCACAGAGATCTGAAGTCACCAAATCTGTTGGTTGATAAGAACTGGAATGTGAAGGTATGTGATTTTGGGTTGTCACGCTTGAAGCACAATACATTTTTGTCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCGCCTGAAGTTCTCCGCAATGAGCCCTCAAATGAGAAGTGTGATGTATATAGTTTTGGAGTGATTCTATGGGAGCTTGCCACTCTAAAATTGCCATGGAGTGGAATGAATCCTATGCAAGTCGTTGGCGCAGTAGGCTTCCAGAATCGTCGCCTTGATATCCCAAAGGATCTTGATCCTGTCGTTGCAAGAATAATTTGGGAGTGTTGGCAAACAGATCCAAACTTGCGCCCCTCTTTTGCACAGCTCACTGTGGCTCTAAAGCCCTTGCAGCATCTTGTTATCTCGTCTCATCAAGACCAGCTGGTTTCTCCTCTGCCGCAGGAGATTTCTGTAAATTCCACCCCTTA 2882 0.4237 MKNIFKKLHIGSNHDPNRSNETPTSVASPSCDFDHRTAPVHNSITPLASPSSSSPSSATVSTGGVSNSAPATVNRQDYFSSEEEFQVQLALAISASNSEFREDPDKDQIRTATLLSLGGHRIDSTRSKDEVAEALSRQYWEYSVLDYEEKVLDGFYDVYGLSTDSAMQGKMPSLTDLEANPGNSSFEVVIVNRTIDPALEELVQVAHCIALDCPVTEVDVRVQRFAELVTGHMGGPVKDANIILARWMERSTELRTSLHTSVLPLGSINIGLSRHRALLFKVLADSINMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPADILSAKDTALKSCNPKILPSLQSARETGYSYSRPMESHGEGSSQNSGIRGGFPPSNGKTYFENSGFLSSNLPSSTDVGVGPSKIPNRVTTSQLENFPPSAGPSLYKGTRGMNAVGDATRLNVNVVPYEQNSPDDTKNLFADLNPFQIKGTGKNSLLNKPVENKVPELQSTRNNTASGRPPVPLMWKNRYAYNEVPRKINRDPNEYNPSLLGFNSSSISEKMDLNDSISSHNPNISRGRGTQNLTQATDSISASGKDVNRVEDLNADCKNGNMVSLHNDMVDVAREQENNEIGFLERRKCTHDRFMGSNLKLKDPESPSSSIDSIANRVDQIFDDVDVGECEIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIITEFLPGGSLYRILHRPNCQIDEKRRIKMAMDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWSGMNPMQVVGAVGFQNRRLDIPKDLDPVVARIIWECWQTDPNLRPSFAQLTVALKPLQHLVISSHQDQLVSPLPQEISVNSTP 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03400 960 Pfam Ethylene-responsive protein kinase Le-CTR1 132 330 - -
Bva13g03400 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Bva13g03400 960 Gene3D Transferase(Phosphotransferase) domain 1 758 941 - -
Bva13g03400 960 ProSitePatterns Protein kinases ATP-binding region signature. 685 707 IPR017441 GO:0005524
Bva13g03400 960 MobiDBLite consensus disorder prediction 42 71 - -
Bva13g03400 960 SUPERFAMILY Protein kinase-like (PK-like) 669 951 IPR011009 -
Bva13g03400 960 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 70 952 - -
Bva13g03400 960 CDD STKc_MAP3K-like 685 928 - -
Bva13g03400 960 ProSiteProfiles Protein kinase domain profile. 679 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g03400 960 Pfam Protein tyrosine and serine/threonine kinase 680 929 IPR001245 GO:0004672|GO:0006468
Bva13g03400 960 MobiDBLite consensus disorder prediction 15 31 - -
Bva13g03400 960 MobiDBLite consensus disorder prediction 360 387 - -
Bva13g03400 960 SMART serkin_6 679 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g03400 960 MobiDBLite consensus disorder prediction 1 71 - -
Bva13g03400 960 Gene3D Phosphorylase Kinase; domain 1 672 756 - -
Bva13g03400 960 PANTHER SERINE-THREONINE PROTEIN KINASE 70 952 - -
Bva13g03400 960 PRINTS Tyrosine kinase catalytic domain signature 792 810 IPR001245 GO:0004672|GO:0006468
Bva13g03400 960 PRINTS Tyrosine kinase catalytic domain signature 902 924 IPR001245 GO:0004672|GO:0006468
Bva13g03400 960 PRINTS Tyrosine kinase catalytic domain signature 753 766 IPR001245 GO:0004672|GO:0006468
Bva13g03400 960 PRINTS Tyrosine kinase catalytic domain signature 858 880 IPR001245 GO:0004672|GO:0006468
Bva13g03400 960 PRINTS Tyrosine kinase catalytic domain signature 839 849 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03400 Bva-Chr13 23318426 23327397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03400 1 916 MAP Kinase Kinase Kinase AT1G08720 56.889 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bva13g03400 PK_Tyr_Ser-Thr 1.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03400 - - aprc:113870732 1455.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03400 13 23318426 23327397 Bva04g02711 04 23671972 23673979 BWGD
Bva13g03400 13 23318426 23327397 Bva13g03400 13 23318426 23327397 ECH