Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03390 ATGGGTGCACCAAAGAAAAATGCGGCTAGGGTTTCAGAGGACCCGGAGGAATTGGCCCGTGTCCCCTTGCAGGCCATCCTCTTGGCTGATAGCTTTACTACTAAGTTTAGACCAATCACTCTCGAACGGCCCAAAGTACTATTACCACTAGTGAATGTTCCAATGATTAACTACACCTTGGCGTGGCTAGAATCTGCGGGTGTTGAAgaggttttcattttttgctgCTCTCATTCCAAGCAAGTGATTGATTATTTGGAGAAATCTGAATGGCTCTCTCAACCGAATCTTACCGTGAGCATGATAGAGTCACATAACTCTGTGAGCGCTGGAGATGCTCTTCGCCTGATTTATGAGCGCAATGTGATACATGGAGATTTTGTCCTTATCAGCGGAGATACTGTAAGCAACATGTCACTTACTCAGGCACTTCAAGAGCATAAAGAgcgaaggaagaaagataatAATGCTGTAATGACTATGGTTATTAAACGATCCAAACCTAATCCAACTATCCATCAATCTCGACTTGGTACAGATGAACTTTTTTTGGCCATTGATCCTAGCACCAATCAGCTTTTGTACTATGAAGAGAAGGCAGACCGTTCAAAAGGGACCGTACATCTTGACAAGTCATTGCTCGTTGATAATCCTTCCATAACTCTGCACCATGACAAGCAGGATTGTTACATTGACATCTGCTCACCGGAAGTCCTTAGTCTATTTACAGATAACTTTGACTATCAACACTTGCGTCGCCATTTTGTCAAGGGATTGCTCGTTGATGATATAATGGgatacaaaatatttgttcATGAAATTCACTCAAGCTATGCTGCAAGGGTTGACAATTTCCGAAGCTATGACACTGTCAGCAAGGATATAATTCATAGATGGACATATCCACTGGTGCCAGATGTTAAGTTTTTTGGTAATTCAGCCATTAAACTCGAACGACAGGGGATGTATCGTGCATCAGAAATATCACAATCACGGTCTGCTGTTATTGGCCCATTTACTGTTATTGGATTTGGCACTAAAATTGGGGATAACACTAAAGTTTTGAATTCTGTGATCGGAGAAAGATGTACAATTGGGTCAAATGTTCATATAGAGGGATCCTACATATGGGATAATGTCACCATTGAAGATGGCTGTAAACTTAGGCATGCAATTGTATGTGATGGAGTCACTATGAAGCCTGGAGCTGTTGCTGAACCTGGTGTGATTTTGTCTTTCAAGGTTGCTATTGGGCAAGACTTTATTGTTCCTCCATACTCGCAAGTATCTTTATTACAGCAACCAGTAGAGGAAGATAGTGATGAGGAGCTGGAATATGCTGATAGTGCCACTGCAATCACAAGCACAGTGGATAACTCACATGTAGAGATTGCATCCAAAGTATCAGAGACACAATCTGTATCTGAGCTAGGTATGGGTGGGGTTGGTTATGTTTGGGAAAATTGTGAAGGACATGAAGAAGAATGGAAGCATTCAGTGGCGCCTATtcctgaaaataaaatttttgaggcAATAAAACTTATGGAAGAGGAAGATGATCTGGAAAAGACTGATGGTGATCACATTCTGCCACGCCCTGAAGATCTAAAAGATGATTTAgatgatgatgaggatgatGATAATGCAGACTCTTTATACTTTGAGAAGGAGGTTGAGGCAACTTTTCTGAGGGCTGTGCATGAAAACATACAAGAAGACCATGTAATCCTAGAAATCAACTCTCTGAGGTTGTCCTATAATAAAGAAGCTGCAGATTGTGCTGGagctatattttattctattgtgAAATATGCTTTGGACATCCCCCATAGTTCAGCTGATAGTTTGTGTAAGAACGTTCAGGGAGTATttgcaaaatggaaaaaggttCTAACATCTTACCTGACTGGCATGGATGAGCAGATTGAAGTAATACTAAAATTCGAAGAAATGTGTTTGGAATCTGCGAAGGAATTTGCTCCATTGTTCACAACGATATTGTCTTACATGTATGATCAAGATATCATACAAGAAGATGCTTTTTTAAGTTGGGAAGATGAGAAGAGAGAGGCAGATGAAtcagacaaaaattttgtcaagCAAGCCGAGAAATTCATTCAATGGTTAAAAGAAGCGTCTGAGGAAGATGAAGAGGACGAAGAATA 2165 0.382 MGAPKKNAARVSEDPEELARVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLESAGVEEVFIFCCSHSKQVIDYLEKSEWLSQPNLTVSMIESHNSVSAGDALRLIYERNVIHGDFVLISGDTVSNMSLTQALQEHKERRKKDNNAVMTMVIKRSKPNPTIHQSRLGTDELFLAIDPSTNQLLYYEEKADRSKGTVHLDKSLLVDNPSITLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFVHEIHSSYAARVDNFRSYDTVSKDIIHRWTYPLVPDVKFFGNSAIKLERQGMYRASEISQSRSAVIGPFTVIGFGTKIGDNTKVLNSVIGERCTIGSNVHIEGSYIWDNVTIEDGCKLRHAIVCDGVTMKPGAVAEPGVILSFKVAIGQDFIVPPYSQVSLLQQPVEEDSDEELEYADSATAITSTVDNSHVEIASKVSETQSVSELGMGGVGYVWENCEGHEEEWKHSVAPIPENKIFEAIKLMEEEDDLEKTDGDHILPRPEDLKDDLDDDEDDDNADSLYFEKEVEATFLRAVHENIQEDHVILEINSLRLSYNKEAADCAGAIFYSIVKYALDIPHSSADSLCKNVQGVFAKWKKVLTSYLTGMDEQIEVILKFEEMCLESAKEFAPLFTTILSYMYDQDIIQEDAFLSWEDEKREADESDKNFVKQAEKFIQWLKEASEEDEEDEE 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03390 721 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Bva13g03390 721 ProSiteProfiles W2 domain profile. 544 719 IPR003307 GO:0005515
Bva13g03390 721 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 720 - -
Bva13g03390 721 SUPERFAMILY Nucleotide-diphospho-sugar transferases 21 369 IPR029044 -
Bva13g03390 721 Gene3D - 540 720 - -
Bva13g03390 721 SMART 542_3 628 715 IPR003307 GO:0005515
Bva13g03390 721 Pfam Nucleotidyl transferase 25 165 IPR005835 GO:0009058|GO:0016779
Bva13g03390 721 Pfam eIF4-gamma/eIF5/eIF2-epsilon 640 719 IPR003307 GO:0005515
Bva13g03390 721 SUPERFAMILY ARM repeat 554 712 IPR016024 -
Bva13g03390 721 SUPERFAMILY Trimeric LpxA-like enzymes 268 428 IPR011004 -
Bva13g03390 721 MobiDBLite consensus disorder prediction 520 548 - -
Bva13g03390 721 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 11 303 IPR029044 -
Bva13g03390 721 MobiDBLite consensus disorder prediction 520 536 - -
Bva13g03390 721 Gene3D Hexapeptide repeat proteins 321 420 - -
Bva13g03390 721 CDD LbH_eIF2B_epsilon 341 419 - -
Bva13g03390 721 CDD W2_eIF2B_epsilon 549 713 IPR044123 GO:0005085|GO:0031369
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03390 1 713 Eukaryotic Initiation Factors Gene Family AT2G34970 64.503 0.0 952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03390 K03240 - gmx:100784894 1141.33