Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03389 ATGGCTTTTATATTAAGCGATGTAGTTTCAAAATTGCAAATGCTAGGCACCTCCGACCATGCCTCCGTGGTGTCTATGAATCTGTTTGTGGCACTCCTTTGTGCTTGTATTGTGATTGGCCATCTTCTGGAGGAGAATCGGTGGATGAATGAATCTACCACTGCCCTTTTGATTGGTCTTTGCACTGGCGTAGTAATTTTGTTGGTCAGTGGCGGTAAAAGCTCGCATCTTCTTGTCTTCAGTGAagatcttttctttatataccTTCTGCCACCTATCATATTTAATGCCGGGTTTCAGGTGAAAAAGAAGCAGTTTTTTGTGAACTTCATCACTATCATGCTGTTTGGTGCTGTTGGGACATTAATATCTTGTGGCATCATAACTTTGGGTGTTACCCAAGCTTTTAAAAGGATGGATATTGGTCCACTGGATATCGGAGATTTTCTAGCAATTGGTGCTATATTTGCTGCAACAGATTCTGTGTGCACATTGCAGGTGCTAAATCAAGATGAGACACCTTTACTCTACAGTCTTGTATTCGGGGAGGGTGTTGTGAATGATGCTACATCAGTGGTGCTTTTCAATGCAATCAAAAGCTTTGACCTCAACCAAGTTGATCATAGAATTGCTTTGCATTTTCTTGGAAATTTCTTATACTTGTTCATCTCAAGCACACTGCTCGGAGTTTTGACGGGTCTGCTTAGTGCTTACATAATCAAGAAGTTGTATATTGGCAGgCATTCAACAGATCGTGAGGTTGCTCTTATGATGTTAATGGCCTACCTTTCGTACATGCTGGCTGAATTATGCTATCTTAGTGGCATTCTCACTGTGTTCTTTTGCGGCATCGTGATGTCTCATTACACTTGGCATAATGTCACTGAAAGTTCACGAATAACTACCAAGCACGCTTTTGCAACTTTGTCATCTATTGCTGAGACTTTTATCTTCCTTTATGTCGGTATGGATGCATTGGACATAGAGAAGTGGAGATTTGTTAGTGATAGCCCTGGAACGTCAGTAGCAGTGAGTTCTATATTGTTGGGTCTAGTTCTGGCTGGAAGAGcagcttttgtttttcctttgtccTTCTTGTCCAATTTGACTAAAAAATCACCACAGCAGAAACTTTCCATTAGGGAGCAAGTGACCATATGGTGGGCTGGTCTCATGAGAGGTGCTGTTTCGATGGCGCTCGCTTATAATAAGTTCACCATGTCAGGGTATACTCAATTGCGGTCCAATTCGATTATGATCACCAGCACGATCACTGTCGTGCTTTTCAGCACAATGGTCTTCGGTTTGATGACTAAACCTCTCATAAAGCTATTGCTGCCACATTCCAAAGGCACAAGCAGCACGGTTTCGACAGATCCGTCTACCCCAAAATCAGTCACAGTGCCGCTACTAGGAGCTTCTCAGGATTCTGAAGTTGACCTTAATGATATTGCTCGTCCTAGCAGCATTCGTGCACTACTAACAACTCCAACACACACTGTCCATCGCTACTGGCGAGAGTTTGATGATGCAATCATGCGTCCAGTTTTTGGTGGCCGGGGTTTTGTTCCTGTAGTTCCTGCCTCACCCACTGATCGCAATGGTCATCAGAGGCAATA 1619 0.4219 MAFILSDVVSKLQMLGTSDHASVVSMNLFVALLCACIVIGHLLEENRWMNESTTALLIGLCTGVVILLVSGGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIMLFGAVGTLISCGIITLGVTQAFKRMDIGPLDIGDFLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLNQVDHRIALHFLGNFLYLFISSTLLGVLTGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSSIAETFIFLYVGMDALDIEKWRFVSDSPGTSVAVSSILLGLVLAGRAAFVFPLSFLSNLTKKSPQQKLSIREQVTIWWAGLMRGAVSMALAYNKFTMSGYTQLRSNSIMITSTITVVLFSTMVFGLMTKPLIKLLLPHSKGTSSTVSTDPSTPKSVTVPLLGASQDSEVDLNDIARPSSIRALLTTPTHTVHRYWREFDDAIMRPVFGGRGFVPVVPASPTDRNGHQRQ 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03389 539 Gene3D - 146 197 - -
Bva13g03389 539 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 538 - -
Bva13g03389 539 Pfam Sodium/hydrogen exchanger family 30 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bva13g03389 539 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva13g03389 539 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva13g03389 539 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva13g03389 539 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva13g03389 539 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 26 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva13g03389 539 PANTHER SODIUM/HYDROGEN EXCHANGER 7 538 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03389 Bva-Chr13 23244354 23249728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03389 4 537 Antiporters AT3G05030 77.963 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03389 - - gmx:100816746 886.33