Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03380 ATGGAGTGCAACAAGGACGAGGCTACAAGGGCTAAGCAAATTGCTGAAAATAGGATGCAAAGTGGTGACTTTGTAGGGGCACTGAAGTTTGCTGTGAAGGCCCAACAACTGTTTCCTGACCTTGAGAACATTGTGCAGATCAATGCTGTTTGCGAGGTTCACTGTGCTGCACAGAACAAACTTTCTGGGCCAGAATTGGATTGGTATGGAATTCTTCAGATTGATCAATTGGCTGATGAAGCAACTATAAAAAAACAGTACAGGAAACTTGCATTGCTACTTCATcctgacaaaaataaattagctgGTGCAGAGGCTGCCTTCAAGTTGATTGGGGAAGCAAATAGGGTGTTAAGTGACCAAGCGAAGCGTTCTTTGTATGACATGAAATACAGGGGCAGGGCTGTAATGAGAAGTGCAGCACCTAAGCCTGCATCCCATCATGCAAATGGGAATGTATTTGCTAAGAAATATGATGGTACTGCAAGCAATGTGCAGAGTTATTTTCATTCACAGTCCACCGGTTGGAATTCCCATCAGCAGTCTGAACAGCAAACGTTCTGGACATGTTGTGAGCATTGTAATACGAGGTACCAGTACTACAAAACCACTGTAAATGCAACTTTACGTTGTCAACAATGTTGCAGGTTCTTCATTGCGCGTGATTCAGGATTCCATGGTGTCCCAGCAGGATATGCATGGACATCATTTGCTAACCAAAAAGAGGCTCCAAAGTGGGTACCAGTGAATCCAGTCTTTCAAGGGAATGGTGGAAAACCTTTTAGTGGAAGACATGATAATTTTGTGCAGTCTGACCCTATGTCCACCACAAAATGCTCTGCTGGAGTTGGTGCGCATTCTGCAGGCAGAAAGAATAAAGATGGCTATATGGCTGCTGGAGGGTTGAAGGCGTCCAGAGCCAGGGAGTCACAAACCCCAGCAAATGTTGGCAGTAAGAGAACTAGGCAGTCAGTGGTGGATCTCAGAGGAAGTTGCAAGGCTGGAAGTGTTAATGACAATGCAAGTGGTTCACCTGAAGAAACACTTCtaaacaagaaaagcaaaattgaGCAGTGTCGGCAGACATCCAAGTCAGATCTTGATGCTAGAAAGTCAGAAGCTGACCATTGTTCATCAAGTGAATCAAGTCCAGAGGTCATTCATTGTCCTGATCCAGATTTCAATGATTTTGAGAAGGGCAGGGCGGAGAATTGTTTTGCTGTTAATCAATTCTGGGCCATTTATGATCCAGTAGATTCTATGCCAAGATTTTATGCCCGTGTCAAGAAAGTTTTATTCCCTGGATTCAAGTTGCTTATTACTTGGCTGGAGCCTAATCCGGATGGCCAAGGTGAGACTGATTCATATCAAAAAGATTTGCCCATTGGTTGTGGTAAGTTCATAGTCGGTGAAACTGTGGAAACTGATGAACATTGTATGTTCTCTCATCAGATGGATTCTATTAAAAGAATTGGCAAGCATATGTATCTAGTATATCCTAGGAAGGGAGAAACGTGGGCCATTTTCGGGGGCAGGGATACAGGAAGGAGTTCTAATCCAGAAAAGCAGTCAAgttatgaatttgaatttgtggAAGTCCTGTCAGATTTTGTTGAGAATGTTGGTATTGAAGTTGTTTATCTAGGCAAGGTGAAAGGGTTTGTTAGCATCTTTCAAAAAACTGAACAGAACGGAAGTGGGATATTTTTTATCCCACCGAATGAGCTATATAGGTTCTCACATCAAATTCCTTCATTTAAGATGACTggtaaagaaaaggaaggtgTTCCTAGAGGATCATTTGAACTTGATACTGCTGCTCTTCCAAGTAATCTGGTTGAAGTGGGTGGTCCCGGTGATGTGGATGTGGAGAATAAAACCTTAAACACTGGAGTCAATAGTTCAAGCCATGAATCCTCTGAATGCAAAGTGGAACAGGTGACGGCTAAGAAAAGTACTCACGAGGCAAAGAAGCAAAAGAGTAGTGATGTCATAGAAGTTTCCTCAATACTCAGAAGATCACCTAGGGGGCTAAACGGGAACAGTATGGATAATGGTCAAGTAAACCCAAGTCAATGTATGGCCACAGAGGATGATAACAAAGACATAGGTCATGTGAATGTCGGTCAACCATTGGCGACGGCTTCTACATGTCACGCTGATGAGAGGATCAGAACACCGAAGAAGGATGACAAAAATGATTCTGAGACAGAGACATTAGGGATACGAAGGTCATCTAGAGATTTAGGCAAAAAAACTGCTAACGGAGATTCAGTACGATGCACCGCCGGCAAGGGAACTGATGAACgtttaaatgacaaaagaaacccaaAAAACAGCAGTTTTGTTCAGTCAGTAGGAAGTACTTATGGTCATGGTGAGAAATTACATCCACATATGAAGCACTCCTGTTCAAACATGAAAGTGAACTCTGTTTCTACATCTTCGATGAAAGAATACAGAAATCTGGGATCTTTGTGTCATGACTTCAGTAAGGGAAAATCTGAAGAGAAGTTTCAGCTTGATCAGATATGGGCATTATATGGTGACAGGGGTGGGATGCCTGATACTTATGCTCAAATTAAGAAGATTGAATTTCCCCCTCATTTTAGATTGCACGTGGCCTTGCTTGAACCCTGTTCAATTCCGAAAGGCGTCAATAAAACAGTTTCTTGTGGTGCCTTCAAAATAAGACCTGCTATAACGAAGATCCTTTCCCGCTCTGCTTTCTCTCATCTGTTGATGGTTGAACCCGTGGCAAAGAATAGATATGAAATTTACCCAAGGAAAGGTGAGGTTTGGGTTCTCCACAAGGACCAGAACTGTGCATCAACTTGTTCAAATTTTGGGAAAGGTGAATGTCACATAGTGGAGGTCTTAGCAGACAGTGACAAGGGCGTAGAAGCTGTGGTTCTAGTACAGCTTAGTGATTCCAAGCCATTTTTCAAGGCTCCTAGAATCCAAAGATCCAAGATTGGTGTCATAGAGATACCACGAGCTGAGATTGCTAGGTTCTCTCATCAGATTCCTGCTTTTCAGCACAGTGGGATAGACAATGTTCATCTGAGGGGGTGTTGGGAGCTCGATCCTTCTTCAATTCCTGGTTTTGTTATCCCATTGGATTG 3125 0.4166 MECNKDEATRAKQIAENRMQSGDFVGALKFAVKAQQLFPDLENIVQINAVCEVHCAAQNKLSGPELDWYGILQIDQLADEATIKKQYRKLALLLHPDKNKLAGAEAAFKLIGEANRVLSDQAKRSLYDMKYRGRAVMRSAAPKPASHHANGNVFAKKYDGTASNVQSYFHSQSTGWNSHQQSEQQTFWTCCEHCNTRYQYYKTTVNATLRCQQCCRFFIARDSGFHGVPAGYAWTSFANQKEAPKWVPVNPVFQGNGGKPFSGRHDNFVQSDPMSTTKCSAGVGAHSAGRKNKDGYMAAGGLKASRARESQTPANVGSKRTRQSVVDLRGSCKAGSVNDNASGSPEETLLNKKSKIEQCRQTSKSDLDARKSEADHCSSSESSPEVIHCPDPDFNDFEKGRAENCFAVNQFWAIYDPVDSMPRFYARVKKVLFPGFKLLITWLEPNPDGQGETDSYQKDLPIGCGKFIVGETVETDEHCMFSHQMDSIKRIGKHMYLVYPRKGETWAIFGGRDTGRSSNPEKQSSYEFEFVEVLSDFVENVGIEVVYLGKVKGFVSIFQKTEQNGSGIFFIPPNELYRFSHQIPSFKMTGKEKEGVPRGSFELDTAALPSNLVEVGGPGDVDVENKTLNTGVNSSSHESSECKVEQVTAKKSTHEAKKQKSSDVIEVSSILRRSPRGLNGNSMDNGQVNPSQCMATEDDNKDIGHVNVGQPLATASTCHADERIRTPKKDDKNDSETETLGIRRSSRDLGKKTANGDSVRCTAGKGTDERLNDKRNPKNSSFVQSVGSTYGHGEKLHPHMKHSCSNMKVNSVSTSSMKEYRNLGSLCHDFSKGKSEEKFQLDQIWALYGDRGGMPDTYAQIKKIEFPPHFRLHVALLEPCSIPKGVNKTVSCGAFKIRPAITKILSRSAFSHLLMVEPVAKNRYEIYPRKGEVWVLHKDQNCASTCSNFGKGECHIVEVLADSDKGVEAVVLVQLSDSKPFFKAPRIQRSKIGVIEIPRAEIARFSHQIPAFQHSGIDNVHLRGCWELDPSSIPGFVIPLD 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03380 1041 SMART dnaj_3 66 123 IPR001623 -
Bva13g03380 1041 Pfam DnaJ domain 67 128 IPR001623 -
Bva13g03380 1041 MobiDBLite consensus disorder prediction 350 378 - -
Bva13g03380 1041 MobiDBLite consensus disorder prediction 335 349 - -
Bva13g03380 1041 MobiDBLite consensus disorder prediction 308 325 - -
Bva13g03380 1041 CDD DnaJ 67 120 IPR001623 -
Bva13g03380 1041 Pfam Domain of unknown function (DUF3444) 384 592 IPR024593 -
Bva13g03380 1041 Pfam Domain of unknown function (DUF3444) 827 1016 IPR024593 -
Bva13g03380 1041 MobiDBLite consensus disorder prediction 713 801 - -
Bva13g03380 1041 MobiDBLite consensus disorder prediction 721 754 - -
Bva13g03380 1041 PRINTS DnaJ domain signature 87 102 IPR001623 -
Bva13g03380 1041 PRINTS DnaJ domain signature 103 123 IPR001623 -
Bva13g03380 1041 PRINTS DnaJ domain signature 69 87 IPR001623 -
Bva13g03380 1041 Gene3D DnaJ domain 65 185 IPR036869 -
Bva13g03380 1041 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 347 621 - -
Bva13g03380 1041 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 801 1035 - -
Bva13g03380 1041 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Bva13g03380 1041 SUPERFAMILY Chaperone J-domain 62 131 IPR036869 -
Bva13g03380 1041 MobiDBLite consensus disorder prediction 643 662 - -
Bva13g03380 1041 MobiDBLite consensus disorder prediction 631 665 - -
Bva13g03380 1041 PANTHER - 347 621 - -
Bva13g03380 1041 PANTHER - 801 1035 - -
Bva13g03380 1041 PANTHER - 1 336 - -
Bva13g03380 1041 MobiDBLite consensus disorder prediction 301 389 - -
Bva13g03380 1041 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03380 Bva-Chr13 23197211 23201696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03380 4 295 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.514 2.23e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03380 - - lang:109332665 1122.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03380 13 23197211 23201696 Bva13g03380 13 23197211 23201696 ECH