Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03356 ATGGCTTTGCGCGAAGCCACCCCTATTCTGTTAACACTCCAATTATCTTCATCATATCTCAGCACCAACACCATTATTGCACTCTCTGTCTTCTTCACACTCCTCTGCGCTTGCATCATCATTGGTCATCTTCTGGAAGAAAATCGATGGGCAAATGAGTCCATCGTTTCCCTCATTCTTGGATTGTGCTCTGGACTAGTGGTATTGCTGGTCACCAAGTTTAATAGTTCTCGATTACTCGCATTCAGCGAAGATCTGTTCTTCCTTTATTTGCTTCCCCCAATCATTTTCAATGCCGGTTTCCAAGTCAAGAAGAAGCAGTTTTTCAAGAATTTCACAACTATACTGCTGTTTGGAATATTTGGCACTGTTATATCGTTCTGTCTCATATCGTTTGGGGCTTTTGTGCTTATTAGAACGATTGGTATCACAAATCTAACCATAAAAGATTATCTAGCTGTTGGTGCTATATTATCAGCAACGGACTCGGTTTGTACATTACAGGTTCTTTCTCAAGATGAAACACCCTTACTTTACAGTATCGTGTTTGGGGAGGGAGTAATAAATGATGCTACCTCTATTGTGCTTTTCAATTCAGTCCAATCACTTGACTTCAGCAGCATCAACGCTATTACGGCCTTGAAATTGTTGGGGACCTTCCTTTACCTTTTCTGCTTTAGCACTGCCCTCGGTATAGCAGCTGGTCTTCTAAGCgcctttattattaaaaaactttactTCGGAAGACATTCTACAGATCGTGAAGTGGCTCTGATGATGCTTATGGCATATTTGTCATACATGATTGCTGAGCTTTTGAATATCAGTGGGATTCTGACAATTTTCTTCTGTGGTGTTGTAATGTCTCATTACACATGGCATAATGTTACAGAAAGCTCAAGGATAACAACTAAGCACAGCTTTGCAACAATCTCATTTATTGCTGAAACCTTTATATTTCTGTATGTTGGCATGGATGCCTTGGATATTGACAAATGGAAAACCAGCACTGCAAGCGCAGGGACTTCACTTGCTGTCAGTTCAACCTTGTTTGCATTAGTGTTAATTGGAAGGGCAGCCTTTGTGTTCCCTATTGCTAATATTTCAAACTGCATCAAGACAAAGGAGAGTGCCAAAATTCAGTTCAGGTCACAGATTATTATATGGTGGGCAGGCCTAATGAGAGGTGCAGTTACCATTGCCTTGTCTTATACCCAATTTGCAAAATCGAACAAAACCTCAGCAACTCAAGATTATGCCTTAATGATCACCTCTACCATAATCGTTGTCTTATTTAGTACGGTGGTCTTTGGTTCCATAACAAAGCCTCTGATAGACGCTGTGCAGTTAAGGCATTCAAAACCAGCAACTTCTGATTCCACTGATAATCTAGAAGATTTGAGATCACTATTGCTTGAAAATAGTAGTCCCAGTGAGCCAGGCAACAGCGATGAGAGAGGTCTCGGGCGAAGTAGCTTCAGGTTGCTGATAAGTTATCCCACTACGACCGTTCATTACTATTGGAGGAAATTTGATGATAGATTTATGAGACCAGTATTTGGTGGAAGGGGTTTTGTTCCATTTGTTCCTGGTTCACCATCTGATACAGCAGCTCGGGACACTTCTTCATA 1631 0.4065 MALREATPILLTLQLSSSYLSTNTIIALSVFFTLLCACIIIGHLLEENRWANESIVSLILGLCSGLVVLLVTKFNSSRLLAFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTTILLFGIFGTVISFCLISFGAFVLIRTIGITNLTIKDYLAVGAILSATDSVCTLQVLSQDETPLLYSIVFGEGVINDATSIVLFNSVQSLDFSSINAITALKLLGTFLYLFCFSTALGIAAGLLSAFIIKKLYFGRHSTDREVALMMLMAYLSYMIAELLNISGILTIFFCGVVMSHYTWHNVTESSRITTKHSFATISFIAETFIFLYVGMDALDIDKWKTSTASAGTSLAVSSTLFALVLIGRAAFVFPIANISNCIKTKESAKIQFRSQIIIWWAGLMRGAVTIALSYTQFAKSNKTSATQDYALMITSTIIVVLFSTVVFGSITKPLIDAVQLRHSKPATSDSTDNLEDLRSLLLENSSPSEPGNSDERGLGRSSFRLLISYPTTTVHYYWRKFDDRFMRPVFGGRGFVPFVPGSPSDTAARDTSS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03356 543 Gene3D - 147 199 - -
Bva13g03356 543 Pfam Sodium/hydrogen exchanger family 31 445 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bva13g03356 543 PRINTS Na+/H+ exchanger signature 86 97 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva13g03356 543 PRINTS Na+/H+ exchanger signature 155 165 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva13g03356 543 PRINTS Na+/H+ exchanger signature 115 123 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva13g03356 543 PRINTS Na+/H+ exchanger signature 100 114 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva13g03356 543 PANTHER SODIUM/HYDROGEN EXCHANGER 11 538 - -
Bva13g03356 543 PANTHER SODIUM/HYDROGEN EXCHANGER 11 538 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bva13g03356 543 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 26 460 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03356 Bva-Chr13 23078647 23082312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03356 15 542 Antiporters AT3G05030 60.766 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03356 K14724 - qsu:112009828 785.408