Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03349 ATGGAAGTTAACACCACTATTGCACCGGTAGCAGGGCCACCCACCCTTACCTCAAAGAACCATACTTTCATATATTCAGAAAACCATAGTCATCACCATGGCCATTTCCCATCAAAAACCATTCTCATAGTCATCATAGCCGTCACCTCCTTTATTGTCTTACTTGCCATTTTTCTGATCATTTTCATGCTCCGTCGACTCAAATCGTCCAGCAAGAATGGTACTTTCAAAGATGACAGCAGAGTACTTCATAACCCAAGTGAGAGGTTCAAGACTTCAACAGTGTTAAACATCAATTCTAGTCCAGACGTGAAGGGTGGGTGTTTTTATGGGGGAAATTTGAGCCGGACACCAACAACTAGATTTAGATTTAGAGGAGTCCAAGTGTTCACATACAGAGAGCTGGAAGTGGCCACAGACGGGTTCAGTGAAGCAAATATGATTGGAAATGGTGGCTTTGGTTTGATGTACAGAGGAGTTTTAAGGGATGGCACTATGGCAGCAATCAAGTTGCTGCAAAGGGAAGGCAAACAAGGAGAGCGTGCTTTCAGAATAGAGGTCGATCTTCTTAGCCGCTTGCAGTCTCCTTATTTGGTGGAGTTGTTTGGCTATTGTGCTGACCAACACCATCGGCTATTAGTATTTGAACTCATGCAGAACGGTACCCTCCAACACCATCTCCACTCTAGTAACCATCAAACTCAACCGTTGGATTGGGGGACTCGGATGAGGATAGCCCTTGATTGCGCCCGAGCCCTTGAATTCCTCCATGAACATGCGGTCCCACCTGTGATTCACCGTGACTTCAAGTGTACCAATGTTTTACTGGACCAAAATTTCCGTGCCAAGGTTTCTGATTTTGGATTGGCAAAGATGGGCTCAGAGAAGATCAACGGTCAGGTTTCTACCCGTGTGTTGGGGACCACTGGGTATCTTGCACCGGAATATATCTCCACCGGCAAGCTCACTACCAAGTCAGATGTTTATAATTATGGGGTGGTTCTTTTGGAATTGCTAACAGGACGCGTATCAGTTGATATTAAGCGGCCCCTTGGAGAGCATGTGCTTGTCTCTTGGGCTCTTCCAAGGTTAACTAACAGAGAAAAATTGGTAGAAATGGTTGACCCTGCTCTACAAGGAAAATACTCGAAGAAGGATCTAATTCAGATAGCTGCAATTGCAGCCATGTGCGTACAGCCAGAAGCAGATTACAGGCCGCTTATGACAGATGTTGTACAATCACTAATACCACTTGTTAGAAGCCCCTCTTCTGTCGGTTCCTCTGCTTCCCTAagatttcaaaaacaaatggCAAGCCCCTGCCATTA 1328 0.4495 MEVNTTIAPVAGPPTLTSKNHTFIYSENHSHHHGHFPSKTILIVIIAVTSFIVLLAIFLIIFMLRRLKSSSKNGTFKDDSRVLHNPSERFKTSTVLNINSSPDVKGGCFYGGNLSRTPTTRFRFRGVQVFTYRELEVATDGFSEANMIGNGGFGLMYRGVLRDGTMAAIKLLQREGKQGERAFRIEVDLLSRLQSPYLVELFGYCADQHHRLLVFELMQNGTLQHHLHSSNHQTQPLDWGTRMRIALDCARALEFLHEHAVPPVIHRDFKCTNVLLDQNFRAKVSDFGLAKMGSEKINGQVSTRVLGTTGYLAPEYISTGKLTTKSDVYNYGVVLLELLTGRVSVDIKRPLGEHVLVSWALPRLTNREKLVEMVDPALQGKYSKKDLIQIAAIAAMCVQPEADYRPLMTDVVQSLIPLVRSPSSVGSSASLRFQKQMASPCH 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03349 442 Gene3D Transferase(Phosphotransferase) domain 1 218 429 - -
Bva13g03349 442 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 18 440 - -
Bva13g03349 442 ProSiteProfiles Protein kinase domain profile. 142 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g03349 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Bva13g03349 442 Pfam Protein tyrosine and serine/threonine kinase 146 415 IPR001245 GO:0004672|GO:0006468
Bva13g03349 442 PANTHER OS01G0750732 PROTEIN 18 440 - -
Bva13g03349 442 Gene3D Phosphorylase Kinase; domain 1 114 217 - -
Bva13g03349 442 CDD STKc_IRAK 148 418 - -
Bva13g03349 442 SUPERFAMILY Protein kinase-like (PK-like) 117 415 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03349 Bva-Chr13 23026958 23030062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03349 126 440 Receptor kinase-like Gene Family AT3G58690 63.354 3.12e-149 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Bva13g03349 PK_Tyr_Ser-Thr 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03349 - - mtr:MTR_1g082580 651.744