Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03343 ATGGCCTTCCCTCTCCCCTTGCTCAACGCCAGTTCTAAACTATCCCTGTCCCTCGTACTTGTCTTCATCTTACTATTGTTCCTCGTAAACCCACCTTCTTTCTCTCCCTACTCTTTTCCCCATTCTTCCCGTAGGTCACTCCTGATCAACTCAACAACTACAATTTCGTCTTGCTCCTTCTCCAGATCCCATTCTAATGGCCTCATCAACTACTTGTCCATCCATCACTGTCTTTTCCATGAAAACTTTTCTCTCTCGATCCcttttctttccctatttctCCTTCTACATTTCTATATTCTCGTCAAAACAGCGCAAGATCATTTCTCTGTGGTCACTACCAAGCTCGCGTTTCACCTCAATTTGTCACCCAGCATGGGCGCCGTAACCCTTTTAGCTTTGGGCAATGGTGCGCCTGATGTTTTCGCATCTGTTGCTGCTCTACGCGGGGGTCAATATCGAACTGGGTTGGGTGCCATACTCTCTGCGGGAACATTTGTCTCAGCATTTGTGGTTGGCTTCGTAGCAATTTACGCCGCACCCTTTTCTGTCGATCCGGCACCATTCGTTAGGGATGTTCTTTTTTACTTAACCGCCGCGTTATTCCTCTTCTATGTGTATCTTAGTGCCGAGATATTCTTATGGCAAGCAATCGGGTTTgttgctttttatttgttttttgttggGTTTGTGTTCTACATGGATTTGGGAATGAGTGATCGGAGAGACAAGAGTGGGAATGTGGTGAGTTTTGCTAGAGATCTTGAGGGACAAAGAGAACCGACAACAGTCAACGGCGACATCAAGGCTTTGAGGGCAAAAGAGAAACAGAAGCGCAGTTCTGGATTACGTCGAGCTATTGAAATGATTTCCACAGTATGGGAGCTTCCTGTGACGATTCTCCTAAAATTGACTATACCCCAACCTGCGCCATCAGAATGGAGCAGATTTTATGCATCAGCTAATATTGCTTTATGTCCACTCGTCCTTTTGTATGCCTGTAACTCATTTAATCATCCCATATCTTTCCTTCTTCCCAACACTCATTTCCCCCTTTGGTTGATAGTGCTGGTGACAAGCTTCTCACTCGCACTTCTTCACCTTATAATGGAAAAGGAGCCTCCAAAAACTGAGCAAGTGCCTGTGGTGCTCATGGCATTTGTTATGAGTGTGTTTTGGATATCTACTATAGCTGGAGAACTGCTGAACTGCCTTGCAACTCTAGGGACACTTCTCAAGTTACCGCCGGCACTCCTAGGTCTTACAGTTCTGGCATGGGGAAATTCTGTGGGGGATCTGGTTGCTGATGTTGCAGTTGCCAAAGCAGGTCATCCAGCAATGGCAATGGCTGGATGCTTCGCTGGACCAATGTTTAACATGCTTATTGGGCTTGGAACTGCTTTAGTGATACAGACGGCCGATGTTTATCCTGATGCTTATAAGCTTAATTTCCACGTGGGTATTGTGATCGCATTTGTGTTCCTGCTTTTAAGCTTAATGGGCTCTCTCTTGGTGATTACTTGGTGCAGATTCAGAGTGCCTAGGTTTTGGGGATTCTGTCTGGTTGGTCTCTATATTGCTTTTATGGCAGTGAGTTTGGTAACAGCCTTGTTTACAGGGTG 1622 0.447 MAFPLPLLNASSKLSLSLVLVFILLLFLVNPPSFSPYSFPHSSRRSLLINSTTTISSCSFSRSHSNGLINYLSIHHCLFHENFSLSIPFLSLFLLLHFYILVKTAQDHFSVVTTKLAFHLNLSPSMGAVTLLALGNGAPDVFASVAALRGGQYRTGLGAILSAGTFVSAFVVGFVAIYAAPFSVDPAPFVRDVLFYLTAALFLFYVYLSAEIFLWQAIGFVAFYLFFVGFVFYMDLGMSDRRDKSGNVVSFARDLEGQREPTTVNGDIKALRAKEKQKRSSGLRRAIEMISTVWELPVTILLKLTIPQPAPSEWSRFYASANIALCPLVLLYACNSFNHPISFLLPNTHFPLWLIVLVTSFSLALLHLIMEKEPPKTEQVPVVLMAFVMSVFWISTIAGELLNCLATLGTLLKLPPALLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLIGLGTALVIQTADVYPDAYKLNFHVGIVIAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGLYIAFMAVSLVTALFTG 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03343 540 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 47 258 - -
Bva13g03343 540 Gene3D - 122 250 IPR044880 -
Bva13g03343 540 Gene3D - 318 535 IPR044880 -
Bva13g03343 540 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 277 539 - -
Bva13g03343 540 Pfam Sodium/calcium exchanger protein 91 232 IPR004837 GO:0016021|GO:0055085
Bva13g03343 540 Pfam Sodium/calcium exchanger protein 384 533 IPR004837 GO:0016021|GO:0055085
Bva13g03343 540 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 47 258 - -
Bva13g03343 540 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 277 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03343 Bva-Chr13 22997828 23001032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03343 15 536 Antiporters AT1G08960 70.467 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03343 K13754 - gmx:100775437 705.286