Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03342 ATGAGGCTTGAATATTACAATCGTATGTCAATGGAAGATTTGGGATCTTACGCAGTACggaaaatattacaaaagcAGCTTGTTCTGAATACTTGCAGAACAGAGCATCCCTTCTTGGAGAAGGACCCTTGGAGTGAATTGGAGCTGAGTCTGGTTTGGAAAAGACATCCTGGTCCTTGGAAGAAGATTTGttctatcaaatttaatacTACTTTTACTGGCTTTGTTGATTTCACTTGGAGCAGAATGGATCACCAAGGGCATAGCCAGAACCAATCCATGGGGGTTGTTGGTAGTGGAGGTCAATTGGCGTATGGTTCAAACCCATACCAACCAAACCAAATAACTGGGACACCAGGTTCAGTTGGGGCCATCCAATCTGCTAGTCAGCCTTCTGGAGCTCAGCTGGGACAACATCAACTTGCTTACCAGCATATTCATCAGCAACAACAGCAGCAACTTCAGCAGCAACTCCAATCCTTCTGGGCAAATCAGTACCAAGAAATTGAGAAGGTAACTGATTTCAAGAACCATAGCCTTCCCTTGGCGAGGATCAAGAAGATCATGAAGGCTGACGAGGATGTTCGAATGATATCAGCTGAAGCACCTGTCGTATTTGCAAGAGCATGTGAAATGTTTATATTAGAGTTAACTTTGCGTTCTTGGAATCACACTGAAGAGAACAAAAGGAGAACGCTTCAGAAGAATGATATTGCAGCAGCAATCACAAGGACTGATATCTTTGATTTCTTGGTTGACATTGTTCCCCGAGAGGACTTGAAAGATGAAGTGCTTGCTTCCATGCCTAGAGGAACAATGCCTGTTGCAGGGCCTGCTGATGCCCTTCCATATTGCTATATGCAACCTCAGCATGCCCCTCAAGTTGGCACTGCTGGTGTCATAATGGGTAAACCCGTGATTGACCCAAGTATGTATGCTCAACAGTCTCATCCCTACATGGCCCAACAGATGTGGCCACATGCACCAGAACAACGACAACCATCTCCAGATCATCCTTG 1019 0.4396 MRLEYYNRMSMEDLGSYAVRKILQKQLVLNTCRTEHPFLEKDPWSELELSLVWKRHPGPWKKICSIKFNTTFTGFVDFTWSRMDHQGHSQNQSMGVVGSGGQLAYGSNPYQPNQITGTPGSVGAIQSASQPSGAQLGQHQLAYQHIHQQQQQQLQQQLQSFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASMPRGTMPVAGPADALPYCYMQPQHAPQVGTAGVIMGKPVIDPSMYAQQSHPYMAQQMWPHAPEQRQPSPDHP 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03342 339 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 83 338 - -
Bva13g03342 339 SUPERFAMILY Histone-fold 150 251 IPR009072 GO:0046982
Bva13g03342 339 Pfam Core histone H2A/H2B/H3/H4 140 242 IPR007125 GO:0003677
Bva13g03342 339 Gene3D Histone, subunit A 141 257 IPR009072 GO:0046982
Bva13g03342 339 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 83 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03342 Bva-Chr13 22995341 22997675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03342 83 325 CCAAT-HAP5 Transcription Factor Family AT1G08970 62.705 3.61e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bva13g03342 CBFD_NFYB_HMF 7.3e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03342 K08066 - gmx:100527803 431.795