Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03319 ATGGACGATCAAACTATCGACATGCTCAGTGAAAAATTCAGTCGATTTGTTCTTGACTGCAATGTGAATTCATCTTCAAACCCTGACTCAGATAATCCTTCAGCGCAAGCGAAACATACACCTGACTGCATGGATGAGAATGGTCAGTCTAATGGAATCCATGACATTTCTCCAGATCAAGATCATATGCTtccaattttgaagaaaatccTGAATTTGAGTACCAAACTTCAGGATTTGAAGAATCAACATATAGCCCTATCTGATGAAGTGAGACTCACAACAACCTCCTTTCCAGGCCCTGATGTTTTGAAGTCTTTTCAGCTCCTTAGTTCTGAATATGAACTTCTGAAAAGCAAGTACCTGGATGAGTCCTCTGAGCGCAAGCGGCTCAGCAATGAAGTGATTGAGCTTAAGGGAAATATAAGAGTTTTTTGCAGATGCAGAccattaaatgaaaatgaaactgcTAGTGGGTCAACATCAGTTGTCAATTTCGAATCATCTCATGATAATGAGCTTCAAGTCATTTGTTCTGATTCTTCCAAGAAGCAgttcaaatttgattatgtGTTTAAACCCGAAGATAACCAAGAGGTTGTCTTTGATGTAACAAAGCCTATTGTTACATCAGTCTTGGATGGTTACAATGTCTGCATATTTGCCTATGGACAAACTGGAACTGGTAAGACGTTTACAATGGAGGGAACTCCAGAACATAGAGGAGTCAACTACAGAACATTGGATGAATTATTCCGGATTTCTGAAGAGAGACAAGGCGTAATGAAATATGAATTGCTTGTTAGCATGTTGGAGGTTTACAATGAGAAGATCAGGGACCTCTTGGCAGACAATTCTACCCATCCttctaaaaaGTTGGAGATAAAGCAATCAGCAGACGGAACCCAAGAAGTTCCAGGACTTGTTGAAGCTCGCGTTTATGGAACAGAGGAGGTTTGGGAAATTCTCAAGTCGGGAAACAGAGCGAGATCTGTTGGATCCACCAGTGCCAATGAGCTTAGCAGCCGATCTCATTGCTTGTTACGAGTTACGGTTATGGgggaaaatttaataaatggtCAGAAGACAAAGTGTCACCTTTGGCTAGTAGATTTGGCTGGGAGTGAGCGAGTGGGAAGAATTGAAGTTGAAGGGGAAAGATTGAAGGAAtcacaatttataaataagtcCCTCTCAGCACTGGGTGATGTTATATCCGCCCTTGCATCCAAATCAGCTCACATCCCTTACAGGAACTCAAAGCTCACCCATATACTGCAGAGCTCCTTAGGGGGTGATTGCAAAACTTTGATGTTTGTCCAGATAAGTCCTAGTGCAACAGATCTTGGAGAAACACTTTGTTCATTGAATTTTGCCACCCGTGTTCGAGGAATTGAGAGTGGTCCAGCTCGCAAGCAAACGGACCTCACTGAATTGTTTAAATACAAGCAGATGGCAGAAAAGCTCAAGCAAGATGAGAaggaaactaaaaaattacatgacaGCTTGCAAACCTTGCAACTAAGGCTTGCTGCAAGAGAACAGCTTTGCAGAAATCTTCAGGAGAAGGTTCGGGACCTTGAGAACCAGATagcagaggaaagaaaaaccaGGCTAAAACAAGAAAGTAGAGCCCTTGCTGCTGTTTCTGCTCAACCTTCAGCACTGCCATCGTCGAAACAAGCAGTAGCAGCTCAGAAAGCCGCAACAGAGAAGAAGCCTCCATTGGGTCCTTCGAAATTAAGATTGCCACTGcgaaaaatttctaatttcttgccGCCTCCATCTCCACTACCATCAAAGAAAAGAGTAGGTCGTACTAATTTCATCGCACCAGCCTCTGCACAAGGAAAGGAAAACATTGCGAGAATGACCTCGAACATAGCAAATACAGAAGCCCTTACCAAACCAAGAAGaagggtctctatggcagtGAGAGCACCACCCCCAGCACCATCAACAGCGCAGGTTCTTCAACCTAGAAGACGGGTCTCTATTGCTACGATCCGTCCTGACACAATTTCTGACATTACCACTCCACTCCGTGCCTCTGCCTCTCGATTCAATAATGGTGGTAGCAGTATAATAGGCCAGCAATCATCGATAAGAAACCAAAGGAAAGCTCGGTATTCAAGGCTGTTCGCCCCACTTCCAGAACTGAGAACGTCAAATGAGAACACTCCAGTTGCCATGAGGAGCAGTAGCAAGTTTATGGGGAGTCCAGTACAGGCAGATTCGAGGGTGGGTAGGCATCCAGCTCTTGTTGCGCTCCAACGCAAGTCTCTGGTATGGAGTCCACTCAAGCTCAGaagtttgaaaaataacaGGAAGTCATTATTGGTTTTGCCATCTCGGCCTTCCATCGAAATGCAATG 2375 0.4101 MDDQTIDMLSEKFSRFVLDCNVNSSSNPDSDNPSAQAKHTPDCMDENGQSNGIHDISPDQDHMLPILKKILNLSTKLQDLKNQHIALSDEVRLTTTSFPGPDVLKSFQLLSSEYELLKSKYLDESSERKRLSNEVIELKGNIRVFCRCRPLNENETASGSTSVVNFESSHDNELQVICSDSSKKQFKFDYVFKPEDNQEVVFDVTKPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLDELFRISEERQGVMKYELLVSMLEVYNEKIRDLLADNSTHPSKKLEIKQSADGTQEVPGLVEARVYGTEEVWEILKSGNRARSVGSTSANELSSRSHCLLRVTVMGENLINGQKTKCHLWLVDLAGSERVGRIEVEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSATDLGETLCSLNFATRVRGIESGPARKQTDLTELFKYKQMAEKLKQDEKETKKLHDSLQTLQLRLAAREQLCRNLQEKVRDLENQIAEERKTRLKQESRALAAVSAQPSALPSSKQAVAAQKAATEKKPPLGPSKLRLPLRKISNFLPPPSPLPSKKRVGRTNFIAPASAQGKENIARMTSNIANTEALTKPRRRVSMAVRAPPPAPSTAQVLQPRRRVSIATIRPDTISDITTPLRASASRFNNGGSSIIGQQSSIRNQRKARYSRLFAPLPELRTSNENTPVAMRSSSKFMGSPVQADSRVGRHPALVALQRKSLVWSPLKLRSLKNNRKSLLVLPSRPSIEMQ 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03319 791 Coils Coil 489 544 - -
Bva13g03319 791 ProSiteProfiles Kinesin motor domain profile. 141 465 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03319 791 Gene3D Kinesin motor domain 136 508 IPR036961 -
Bva13g03319 791 MobiDBLite consensus disorder prediction 24 48 - -
Bva13g03319 791 Pfam Kinesin motor domain 147 465 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03319 791 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 501 IPR027417 -
Bva13g03319 791 SMART kinesin_4 139 473 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03319 791 PANTHER KINESIN-LIKE PROTEIN KIN-14S 80 782 - -
Bva13g03319 791 Coils Coil 70 90 - -
Bva13g03319 791 MobiDBLite consensus disorder prediction 550 581 - -
Bva13g03319 791 PRINTS Kinesin heavy chain signature 366 384 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03319 791 PRINTS Kinesin heavy chain signature 415 436 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03319 791 PRINTS Kinesin heavy chain signature 335 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03319 791 PRINTS Kinesin heavy chain signature 215 236 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03319 791 CDD KISc_C_terminal 139 466 - -
Bva13g03319 791 PANTHER KINESIN-RELATED 80 782 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03319 Bva-Chr13 22921319 22925723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03319 112 491 Calmodulin-binding Proteins AT5G65930 42.448 9.31e-77 269