Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03313 ATGGCGCCAACAAGAAAATCTAGAAGTGTGAATAAGCGGTTTTCAAGTTCAAATGAGGTCTCTCCTGAGAAAGATGGAgttaactcaaataaaaataagcaaCGGAAGAAAAAGTTGTCTGACAAACTAGGAAGCCAGTGGAGCAAGGAGGAACTACAGCGATTTTATGAAGCATACCGGAAGTATGGGAAAGATTGGAAGAAAGTGGCTGCTGTTGTACGTAACAGATCAACTGAAATGGTGGAGGCTCTTTACAATATGAATCGGGCTTACTTATCTCTTCCAGAGGGGACAGCTTCTGTTGTTGGACTCATAGCAATGATGACAGATCACTATAATGTGCTGGAAGGGAGTGATAGCGAAAGGGAGAGCAATGATGCACCAGGGTCTCAGAAACCTTTGAAACGAAAGTGTGGGAAATTTCAGCTTAGCGTCTCAAAAGATACTATCCAGTCTCAgtcaatttcttcaaatgatGGTTGCCTCTCATTATTAAAGAGAAGGCGGGTTGAAGGTACCCAGCCTCGTGCAGTTGGGAAAAGGACACCTCGCTACCCAATTTCCTATTCGCATAAGAGAGATACTAGGAAAGATTATGTTTGGCCTAATAAAAGAAGCCTGAAGTCAGAGGTTGATGCTAATGATGATGACGTTGCACATGTGGCAGCGTTGGCATTAACTGAAGCTGCACAAAGAGGAGGCTCTCCCCAGGTTTCTCAAACACAATACAGAAAAGCAGAGCAGAAGTCCTCACCTGGTCAGAGCTGGGAAAGAAAGCATCAAAATTCTGAGACAGCTGGTGTCAAGTTTTTCAATGCTTCTTTAGATGAAGAGTGGTTGGAAGGTAGTATAGAAAGCAGGGGAGCTGAAAATGGAGAATATGCTAGAGATACTAGTTCCTTGATGGACATGGAAGGTGTAGGCACAGTTGACTTTCATGGGAAGGGgaagaaaatttatagaaagaaagagaaagtggaAAATGTTGGAAACCATCTGCTTGATGATGGCGGAGAAGCATGTAGTGGCACTGAGGAAGGATTTAACATTAGTTCTTCAAGAGAAAAGGTTGATATTGAGGTTACTAATGCTAAATCTGAGCAATTCTCTGTGAAAGGtcagaggaaaagaaataagaaacttTTCTTTGGAGATGAAAGCTCTGCCTTAGATGCTTTGCAGACTTTGGCTGACTTGTCTCTAATGATGCCGTCAGCTACAACGGAATCTGAATCATCTGTCCAGTTGAAGGAAGAAAGGATGGCTTTGGATAAAGATGAGAAGTCTGGTTTACCTGAAGCTACATCAACAAGCCAGAACAGAGATAGAATTAAAATCCCAGGTCCTAAGCAAAAAGTTGTTCATGCTGTTAAGGTTTCAGACTCACGGAAGTCCAAACTTGGAAAGGAATTGACAAATGATGCTAATGCTCTCTCTGAATCGAAAGAACAGTTACTCTCTGCTGATAGAACATGGAAAAGGAAGCGCAAGCCGGCAGTTTCTAGGATTTCAAATGTAAAGCTGGATTCTCATCCAATTGATCCCTTGAATAAGGAGGCAGTAGTTGAAGAGAACAAGCCAGTGATGAAAGGAAAACACACTGGTCAGCTTTTTACTCTACCAAAACAGTTGAAGTCAGTTACATCGTCAGAAAGCTCATTGGGTAGTGATCAGAAAGATTTAACTGTATCAACTGGAGAAGTTTCACTTGTAGGTGAAGTTAGTTTACCAACTAAACAGCGAAGTAGGCGTAAAATTAATCCACAGAGAACATTCATGCCAAAAGAGAAGTCCTCTGAGAATATCTTGAAAAGTCGATCTAATAAATACTCTATTCCCCTCCAAGACAGGGCATTATGTTTAAAGGAAAAGCTTAGCGGTTGTTTGTCATCTTATATGGTCCGTAGATGGTGTGCTTTTGAATGGTTTTATAGTGCAATTGATTTTCCATGGTTTGCCAAAAGGGAGTTCATGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGGTTAACTCGTGTTGAGTGGAGTGTTATAAAAAGTTCCCTTGGAAAACCTCGCAGGTTTTCTGAACACTTTCTAcgtgaagaaagacaaaaacttGAGCAGTATCGGGAATCTGTGAGGAAGCATTACATTGAGCTTCGTACTGGTGTTAAGGATGGACTTCCAACAGATTTAGCAAGACCTTTATTTGTTGGACAACGAGTAATTGCTCTTCACCCAAAAACAAGAGAGGTACATGATGGGAGTGTGCTCACAGTTGATCATGACAAGTGCAGGGTACAGTTTGACCGTCCTGAATTAGGGGTTGAATTTGTCATGGATATTGATTGCATGCCATTGAATCCATTAGATAATATGCCCGAAGCTTTGAGAAGAAAGTATGATGCAGGCCGTGCAGGCAAAATCTCTTGTATGACTAAAGAGCCACAGATGAATGGAAGTCCAAATTGTGGGGGTTGTGTGACATATTCTTCAAGTGGACCCGTGGAGAATTTACCATCCACTTCAAGTACTTTGGTAAAGCAGGGAAAGGGTGATGTTAGTCATGGGATTGCACAGGCAAAGGCTGCTACCGTTGATAACGTTAGTACACCGCAAGCGGCATATGGTCAATCTTGTGCATTGACACATCAAGCTAGGGAAGCTGACGTACACGCCCTTTCTGAGCTGACTCGTGCTCTTGATAAAAAGGAATCTTTATTAATGGAGCTCAGAAATACAAACAGTGACATATTGCAAAACCAAATTGACATAGATTGCTTAAAAGATTCAGAGTCTTTCAAGAAGCATTACGCCACGGTTTCTTCTGCTTTGCTTCATTTGAGGCAACGCAATACTTACACAGCAAACCCTTTGCCACCGTGGATGAAGCCCCAAGCAAGTTTCAGTATTCATGATGGCCTTCCCGGTACATTGGATATTTCTCAACCACAAGACTTGGGGTCAACTGTTGTTGAAATTACCAAAGGATCCAGGCTCAGAGCGCATGCCATGGTGGATGCTGCAATTCAGGCATTTTCTTCGACAAAGGAAGGTGAAGACACTTTCGTGAAGATTGGCCAGGCATTGGATTCGATTGATTATCAGCAGTTGGCCTCCAACTTTAGGCTACCTGTGATGAGGTCCCAGGAACAAATCAATGGCAGTTTCGATCACCATAATCAGTCAGTTTACGGTGCATCAGAACACTTACTTAGTGATGCATCTGATCCAAAATTGCATAATGAGTCTGACAAAGTTGATGTTCAATTTCCTTCTGAGCTTATCGCTTCCTGTCTTTCTACCTTAATCATGATACAGACTTGTACTGAACGACAATACCCCCCAGCTGATGTGGCTCAGATATTAGACTCCGCTGTTACCAGCCTCCATCCATGTTGTCCACGGAACCTTCCTTTTTACAGAGAAATCCAAATGTGCATGGGAATACTCAAGACCCAGATTTTAGCCCTCATCCCAACTTG 3473 0.4115 MAPTRKSRSVNKRFSSSNEVSPEKDGVNSNKNKQRKKKLSDKLGSQWSKEELQRFYEAYRKYGKDWKKVAAVVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEGSDSERESNDAPGSQKPLKRKCGKFQLSVSKDTIQSQSISSNDGCLSLLKRRRVEGTQPRAVGKRTPRYPISYSHKRDTRKDYVWPNKRSLKSEVDANDDDVAHVAALALTEAAQRGGSPQVSQTQYRKAEQKSSPGQSWERKHQNSETAGVKFFNASLDEEWLEGSIESRGAENGEYARDTSSLMDMEGVGTVDFHGKGKKIYRKKEKVENVGNHLLDDGGEACSGTEEGFNISSSREKVDIEVTNAKSEQFSVKGQRKRNKKLFFGDESSALDALQTLADLSLMMPSATTESESSVQLKEERMALDKDEKSGLPEATSTSQNRDRIKIPGPKQKVVHAVKVSDSRKSKLGKELTNDANALSESKEQLLSADRTWKRKRKPAVSRISNVKLDSHPIDPLNKEAVVEENKPVMKGKHTGQLFTLPKQLKSVTSSESSLGSDQKDLTVSTGEVSLVGEVSLPTKQRSRRKINPQRTFMPKEKSSENILKSRSNKYSIPLQDRALCLKEKLSGCLSSYMVRRWCAFEWFYSAIDFPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLREERQKLEQYRESVRKHYIELRTGVKDGLPTDLARPLFVGQRVIALHPKTREVHDGSVLTVDHDKCRVQFDRPELGVEFVMDIDCMPLNPLDNMPEALRRKYDAGRAGKISCMTKEPQMNGSPNCGGCVTYSSSGPVENLPSTSSTLVKQGKGDVSHGIAQAKAATVDNVSTPQAAYGQSCALTHQAREADVHALSELTRALDKKESLLMELRNTNSDILQNQIDIDCLKDSESFKKHYATVSSALLHLRQRNTYTANPLPPWMKPQASFSIHDGLPGTLDISQPQDLGSTVVEITKGSRLRAHAMVDAAIQAFSSTKEGEDTFVKIGQALDSIDYQQLASNFRLPVMRSQEQINGSFDHHNQSVYGASEHLLSDASDPKLHNESDKVDVQFPSELIASCLSTLIMIQTCTERQYPPADVAQILDSAVTSLHPCCPRNLPFYREIQMCMGILKTQILALIPT 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03313 1157 Pfam DIRP 642 743 IPR033471 -
Bva13g03313 1157 Pfam Myb-like DNA-binding domain 45 82 IPR001005 -
Bva13g03313 1157 MobiDBLite consensus disorder prediction 413 431 - -
Bva13g03313 1157 MobiDBLite consensus disorder prediction 1 25 - -
Bva13g03313 1157 SMART sant 43 91 IPR001005 -
Bva13g03313 1157 Coils Coil 890 917 - -
Bva13g03313 1157 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 1 1157 IPR028306 -
Bva13g03313 1157 MobiDBLite consensus disorder prediction 230 263 - -
Bva13g03313 1157 ProSiteProfiles Myb-like domain profile. 45 86 IPR001005 -
Bva13g03313 1157 MobiDBLite consensus disorder prediction 1 45 - -
Bva13g03313 1157 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 81 IPR017930 -
Bva13g03313 1157 PANTHER LIN-9 1 1157 IPR010561 GO:0006351|GO:0017053
Bva13g03313 1157 MobiDBLite consensus disorder prediction 172 194 - -
Bva13g03313 1157 Coils Coil 695 715 - -
Bva13g03313 1157 Gene3D - 3 99 - -
Bva13g03313 1157 ProSiteProfiles SANT domain profile. 42 79 IPR017884 -
Bva13g03313 1157 CDD SANT 47 81 IPR001005 -
Bva13g03313 1157 MobiDBLite consensus disorder prediction 232 263 - -
Bva13g03313 1157 SMART DIRP_2 643 744 IPR033471 -
Bva13g03313 1157 SUPERFAMILY Homeodomain-like 42 90 IPR009057 -
Bva13g03313 1157 MobiDBLite consensus disorder prediction 404 450 - -
Bva13g03313 1157 MobiDBLite consensus disorder prediction 26 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03313 Bva-Chr13 22886376 22897664 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva13g03313 DIRP 1.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03313 - - gmx:100789533 1546.18