Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03298 ATGACTTTTGGTTGGAAGAAAATGGGTTATGGTTCTGAGGCTCTCCGCACGAGCTTCCTCATCATTTTCGTGTTCCTATCATTACAAAGAACCCGCATTTTGACTGCGGAAGCTCTTTTGAATGGAGCAGGAAGCTTCCATTTCCATGGCCTGTCAAAGATGTATTTCATGGAGGAGAATGTGcaggaaaatgaaaaccaCGTTAAGAAAATCTCAGGACAGGATGCGAATGAAGAGAAGGATGCTCTGATAGTGGAAAAGTTTAGAGCTTTGCTTGGACTCAAGAGTTTCCACACCACAGGAGATTCGCTGTTCGTCTCACCGTCACCTTCTCCATTGCCCAGCATTGGAGCTGAGGCTCCTGCACCTCTTCCTATACCTCCACTCGTCCATGCCCGTCTCCATCATCCGCTGCATCATTCCCATTTGAAACCACTACCTCATAAGATTCAAGATGAAGATAGAGGCAGAGCTAGGAGAATACTAGTAGCTGCTCTTGTGTCTGTGGGTGTTGCTACAGGGATTTGTGCTATTGGCCTTTTCTGGGTTTGCAAGAAATGCAGAAATCACAGAAAGAAACCCAAAAGAACAATGCCTCTATATAGCAAGATTAAAGGGATTAAAGGTGACTCTCAAAATTCATCAAGCAAGGTGAGTGTAAACTCTGGCCTAGATCTATTTTATCTCAATGCAATAGGCACAGATATAGAGCAACACAATTGCAGCCCGAAACAAACTTCTGAGGCTGTAAATAGtacttcaaattcaaatcataGCACTCCAAAATGTTCAATTTACGAGAAGACAGAAGCAAATAAAGAAGTGACTAGTTCGGATAATGGTAGCAGTTCTTGCAGAATGGAAATTCCTTCTGTTCACGAGTATGTGGAATCAGTGAAATATGATTCTGAATCTGAATCTGATGGCGGCAACTCTTTCTTGGGTGATAAAACTATCTCCATGGAAAACCATTCATCAGACCACGAgagttttcattcttttgttgatTCACGTTTTTCAAATGTCAGGGCTTCTAATGCTTCTGCGGATTGTCTATGTGAGACATCATCACCTCTGTCTTCTCAAGCATCACGTTCAAGGCCTTCGCTGGTTGATTCTAGTTATACACCTGTTCCATCAACACACCAAATTCCTTGTTCTCCCCAGAGTTCAATTCCATATACACAATCTCCTCATGTTCCCGAACGGAAAGAGCAAAAGATTGAAACTTTATTGCAAAGCCCACAACCCCTCGTGGTCCCTTCACCACCTCCGCCTCCGCCACCACCTATACCACCGTCCCAACCAATGCCTCTGTTTGCTTTGCATTCTCTTTCTAGAACCCCATCACAGTCTCCCCGTTCaacatttcataatttatcatCCCCAACTCCAATAAATTCAGGTTGTTTCTCGGGAACAAgtcaaaaaagagaaaacggTTCGCCTTCTCCATCTCAATCGAATCGGACAGAATCTCCTCCTACTCCCAACATTCCTCCGCCGCCACGTCCACCGCCATTTCTTaatggaaataataataacaatgggAAAACTCCACCTCCTCCGCCAGCACAACTTCCTCAATTTACGCCACGCAGCAAAGATGGAGCCCCGCTGCCAAAACTCAAACCACTTCATTGGGACAAAGTAAGAGCCGCCCCTGATCGCACAATGGTTTGGGATAAAATAAGATCGAGCTCATTTGAGTTGGATGAGGAAATGATAGAGTCCCTTTTTGGCTATAATCTACAAAATTCAATGAAGAATGATGAAACAAAGAGCAAAACCCCTTCTCCAAGCAAGCATGTGCTTGAGCCCAAAAGGCTGCAGAACATAGCAATACTCTCGAAAGCTCTAAACGTCACAGCAGAACAAGTATGCGAATCTCTAATACAAGGAAAGGGCTTGTCTTTACAACAACTAGAGGCGCTGGTGAAAATGGCACCAACCAAGGAAGAAGAGGCTAAGCTGTCTAGTTATAAAGGAGACATTAATGAATTGGGATCTGCAGAAAGGTTTGTGAGAACAACGCTTAGCGTGCCATTAGCCTTTCAAAGAGTGGAAGCAATGCTTTACAGAGAAACATTCGAAGACGAGGTTGTTCACCTTAGAAACTCTTTTTCAATGTTAGAGGAAGCGTGCAAGGAGCTAAGATCAAGCAGGCTCTTCTTGAAATTACTTGAAACCGTGCTTAAAACGGGGAATCGTATGAACGTGGGCACAATCAGAGGAGGTGCCAGGGCATTTAAACTCGATGCCCTTCTTAAACTCGCTGATGTTAAGGGAACCGATGGGAAAACGACGTTACTCCATTTTGTCGTTCAAGAGATTGTTCGGTCAGAAGGGATCAGAGTTTCAGACAGCATTATGGGGAAAATCAAccagagaaataaaaacagaacaGAGGAAGAACAGGAAGAGGATTACAGAAGAATGGGTCTAGAACTTGTTTCTGGTCTGAGTACAGAGCTCTATAATGTGAAGAAGACAGCTACAATTGACTTAGATGTTCTTGCCAGCTCTGTCTCAAACCTATCAGATGGAGCAGCTAAGCTAGAACATTTAGTGCAGAACGAGGATGAAAAAGGTGACAACTTTGTTAGTTCAATAAAGTCTTTCCTGAATTATGCGGGTAAAGTTCTGAAGGAGTTACAAGGGGATGAAGATAGGGTGCTGGCACGTGTGAAAGAGATTACAGAGTACTTTCATGGAGATGTGAGCAAAGAAGATGGAAACCCACTTAGGATATTTGTGATTGTGAGAGACTTTCTGGGCATGTTAGATAACGTGTGTAAAGAGCTTAGAAGGTCTAAAGTTCCTCGCAGTCCAAACCCTCTTGCTCCATTCCGATA 2855 0.4193 MTFGWKKMGYGSEALRTSFLIIFVFLSLQRTRILTAEALLNGAGSFHFHGLSKMYFMEENVQENENHVKKISGQDANEEKDALIVEKFRALLGLKSFHTTGDSLFVSPSPSPLPSIGAEAPAPLPIPPLVHARLHHPLHHSHLKPLPHKIQDEDRGRARRILVAALVSVGVATGICAIGLFWVCKKCRNHRKKPKRTMPLYSKIKGIKGDSQNSSSKVSVNSGLDLFYLNAIGTDIEQHNCSPKQTSEAVNSTSNSNHSTPKCSIYEKTEANKEVTSSDNGSSSCRMEIPSVHEYVESVKYDSESESDGGNSFLGDKTISMENHSSDHESFHSFVDSRFSNVRASNASADCLCETSSPLSSQASRSRPSLVDSSYTPVPSTHQIPCSPQSSIPYTQSPHVPERKEQKIETLLQSPQPLVVPSPPPPPPPPIPPSQPMPLFALHSLSRTPSQSPRSTFHNLSSPTPINSGCFSGTSQKRENGSPSPSQSNRTESPPTPNIPPPPRPPPFLNGNNNNNGKTPPPPPAQLPQFTPRSKDGAPLPKLKPLHWDKVRAAPDRTMVWDKIRSSSFELDEEMIESLFGYNLQNSMKNDETKSKTPSPSKHVLEPKRLQNIAILSKALNVTAEQVCESLIQGKGLSLQQLEALVKMAPTKEEEAKLSSYKGDINELGSAERFVRTTLSVPLAFQRVEAMLYRETFEDEVVHLRNSFSMLEEACKELRSSRLFLKLLETVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKINQRNKNRTEEEQEEDYRRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLSDGAAKLEHLVQNEDEKGDNFVSSIKSFLNYAGKVLKELQGDEDRVLARVKEITEYFHGDVSKEDGNPLRIFVIVRDFLGMLDNVCKELRRSKVPRSPNPLAPFR 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03298 951 MobiDBLite consensus disorder prediction 300 320 - -
Bva13g03298 951 MobiDBLite consensus disorder prediction 444 493 - -
Bva13g03298 951 MobiDBLite consensus disorder prediction 417 437 - -
Bva13g03298 951 PANTHER FORMIN-LIKE PROTEIN 20 335 - -
Bva13g03298 951 PANTHER FORMIN-LIKE PROTEIN 422 951 - -
Bva13g03298 951 SMART it6_source 533 943 IPR015425 -
Bva13g03298 951 MobiDBLite consensus disorder prediction 243 265 - -
Bva13g03298 951 ProSiteProfiles Formin homology-2 (FH2) domain profile. 533 951 IPR015425 -
Bva13g03298 951 PANTHER FORMIN-RELATED 20 335 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bva13g03298 951 PANTHER FORMIN-RELATED 422 951 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bva13g03298 951 Gene3D Formin, FH2 domain 557 943 IPR042201 -
Bva13g03298 951 MobiDBLite consensus disorder prediction 353 397 - -
Bva13g03298 951 Pfam Formin Homology 2 Domain 536 928 IPR015425 -
Bva13g03298 951 MobiDBLite consensus disorder prediction 305 320 - -
Bva13g03298 951 MobiDBLite consensus disorder prediction 494 509 - -
Bva13g03298 951 MobiDBLite consensus disorder prediction 353 547 - -
Bva13g03298 951 SUPERFAMILY Formin homology 2 domain (FH2 domain) 546 939 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03298 Bva-Chr13 22799997 22804110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03298 518 951 FH2 protein (formin) Gene Family AT3G05470 75.227 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03298 - - qsu:112030660 1030.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03298 13 22799997 22804110 Bva13g03298 13 22799997 22804110 ECH