Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03280 atgatgatgatgaccaTGGAAGGAATGATGGATAAGGGTGTTGTTGATGATGTTATTAGGAGGCTACTTGAAGGCAAAGGAGGAAAACAGGTTCAGCTTTCCGAGTCCGAGATCCGTCAACTCTGCGTCAACGCTCGCCAAATCTTCCTCTCACAGCCCAATCTCCTCGAGCTCCGTCCTCCAATTCGTATCTGCGGTGATATACATGGGCAGTATCAAGACTTACTGAGGCTTTTCGAATATGGTGGCTACCCTCCAGCCGCAAACTACTTGTTTCTGGGGGATTATGTAGACAGAGGGAAACAAAGCTTGGAGACTATATGTTTGCTTTTGGCCTACAAAATAAGATATCCTGACAAAGTTCATCTACTGAGAGGAAACCATGAGGATGCAAAGATAAACCGAATATATGGTTTTTATGATGAATGTAAAAGGAGGTTCAATGTGAGGCTATGGAAGATATTCACAGACTGCTTTAACTGTTTGCCTGTAGCTGCACTCATCGATGACAAAATACTTTGTATGCATGGTGGCCTTTCTCCAGagttacaaaatttgaatcaGATACGAGAACTTCCTAGGCCAACTGATATTCCAGATAATGGTCTCTTATGTGATCTGCTTTGGTCTGATCCTGATTCTAGCATTGAGGGCTGGGCAGAGAGTGACCGAGGTGTCTCGTGTACATTCGGGGCGGATGCACTGACTCagtttttggataaaaatgaCCTTGATCTTGTTTGCAGAGGTCATCAGgTGGTGGAAGATGGATATGAATTTTTTGCCAAAAGGAGATTAGTCACAATATTTTCTGCTCCGAACTATggtggggagtttgataatgcTGGTGCATTGTTGAGTGTTGATGAATCTCTTGTGTGTTCCTTTGAGATAGTGAAACCGGCTAATAAAGGATCAGGAAGTGGTTCGTCAAAAGGGAATCTTAAGAAGCCCCCCAAAACTACATA 968 0.406 MMMMTMEGMMDKGVVDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPNLLELRPPIRICGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKVHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPELQNLNQIRELPRPTDIPDNGLLCDLLWSDPDSSIEGWAESDRGVSCTFGADALTQFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEIVKPANKGSGSGSSKGNLKKPPKTT 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03280 322 SMART pp2a_7 33 303 IPR006186 GO:0016787
Bva13g03280 322 MobiDBLite consensus disorder prediction 304 322 - -
Bva13g03280 322 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2 308 - -
Bva13g03280 322 Pfam Calcineurin-like phosphoesterase 62 253 IPR004843 GO:0016787
Bva13g03280 322 Pfam Serine-threonine protein phosphatase N-terminal domain 15 59 IPR031675 -
Bva13g03280 322 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 2 308 - -
Bva13g03280 322 MobiDBLite consensus disorder prediction 303 322 - -
Bva13g03280 322 Gene3D - 8 308 IPR029052 -
Bva13g03280 322 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Bva13g03280 322 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Bva13g03280 322 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Bva13g03280 322 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Bva13g03280 322 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Bva13g03280 322 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Bva13g03280 322 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Bva13g03280 322 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Bva13g03280 322 CDD MPP_PP1_PPKL 14 301 - -
Bva13g03280 322 SUPERFAMILY Metallo-dependent phosphatases 18 303 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03280 Bva-Chr13 22712956 22716179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03280 62 247 Calmodulin-binding Proteins AT5G63870 33.484 7.86e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03280 K06269 - gmx:100805030 605.52