Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03276 atgtcTGCGGCTGGAGACAGGAAGAAGAGAACTGCGGTTATTGGCGTTTCAGCCTTCATACTGGTTGCCATGGTTGTCGCGGTTACCATTGGTATCACAGTTGATCTGCAAGAGTCTTCTGATGGAAACGACGAGTCTCATATGTCGTCCACAATGAAGGCTGTGAAATCACTTTGCCAACCCACCGATTACAAAAAGGAATGCTTTGACAGCCTGAAAGCCCAAGCTGGCAACGCAACAAGCACAAGAGAACTGGTTAAGATTTCATTTCACGTCACCATTGAAAGGATCGTGGAAGGTGTCAAGAAATCCCAACTGTTGCACGCTCTGGAGAAGGAACCCAGAGCCAAGATGGCACTCGAGACATGCAAGTACCTCATGGAGTTATCCATTGCTGATCTCGAACGCTCAATTGAGAAAATTGGCGATCTCGATACCATGAACATCCACGACATAATCATGGACTTGAAGGTTTGGCTCAGCGGTACCATCACGTATCAAGAAACATGCTTGGATGGGTTCCAGAACTCCACGAGCGAAGCTGGTCAGAAGATGAAAGAGGCATTGACATTAGCCATGCGCTTGAGCAGCAATGGGCTTGCCATCATTGATGATTTCTCAGAAACTCTCGCCAAGTTAAACATCACGCCACACGCTCAGGGACGCAGACTGCTTCAAGACCGTGttccagaaaataaatatgcttTGGATTTGGAAGACAATGTTTTGGGTCACGGCGAGGTTCCCTTGTGGGTTGGTGGTGGTATCCGTCGCAGACTCTTGTCGGATAAAGTCCCCGGCTTAGGCAAACGCAAGCCTGATGTTGTTGTTGCCAAAGACGGCAGTGGAAATGTCAAGAGCGTCAACGAGGCATTGAAGAAGGTGCCCAAGAAGAATTCTAAGCCCTTCATAATTTACGTTAAGGAAGGTGTTTACAATGAGTATGTCACCGTCGAGAGGCGCATGACTCATGTCGTCATCATCGGCGATGGTGGAGAAAAGACACGGATCACCGGCAACAAAAACTTCATCGACGGGGTTAACACTTACAAAACCGCCACCGTCGCTGTTGAGGGGGATCACTTCATGGCTGTGAATATTGGGTTTGAGAACTCTGCTGGTGCCGAGAAACATCAAGCGGTAGCGTTAAGGGTGGGAGCAGACATGTCTGTGTTCTATAAATGCACAATGGATGGGTACCAAGACACGCTTTATGCCCACACCAAGCGTCAATTCTACAGGGATTGTGCTATTTCGGGCACAATTGACTTTGTGTTTGGCGATGCTCTTTCCATATTCCAGAATTGCACGTTCAAGGTTAGAAAGCCAATGGAGAATCAGCAATGCATTGTGACTGCACACGGCAGAAAGGATAGACACGAACCAACGGCCATAATCATTCAAGGAGGGTCAATTGTGTCTGACCCATCATTCTACCCTGTTAGATTAACCAACAAAGCTTATTTGGCTCGTCCGTGGAAGGCTTATTCAAGGACCATCATCATGGATGCATTCATTGATGACTTGATCACACCCGATGGTTATTTGCCATGGCAAATCAACCTAACGAATGTGGGGACTACTACTTGCTTCTACTCCGAGTTCAACGACCGGGGCCCCGGTTCAGACAAAACCAAGCGAGCTAATTGGCCCGGTGTTAAGACCATAACTGCAGAACACGCTCTTGATTTCACACCATTCAGGTTCTATAAAGGAGATACTTGGATTAAACAAACTGGAGTACCGTACTCCCCTGGTGCCTTGTCCTCTAAGTCTGATTCGGACATTGATCACTA 1796 0.4699 MSAAGDRKKRTAVIGVSAFILVAMVVAVTIGITVDLQESSDGNDESHMSSTMKAVKSLCQPTDYKKECFDSLKAQAGNATSTRELVKISFHVTIERIVEGVKKSQLLHALEKEPRAKMALETCKYLMELSIADLERSIEKIGDLDTMNIHDIIMDLKVWLSGTITYQETCLDGFQNSTSEAGQKMKEALTLAMRLSSNGLAIIDDFSETLAKLNITPHAQGRRLLQDRVPENKYALDLEDNVLGHGEVPLWVGGGIRRRLLSDKVPGLGKRKPDVVVAKDGSGNVKSVNEALKKVPKKNSKPFIIYVKEGVYNEYVTVERRMTHVVIIGDGGEKTRITGNKNFIDGVNTYKTATVAVEGDHFMAVNIGFENSAGAEKHQAVALRVGADMSVFYKCTMDGYQDTLYAHTKRQFYRDCAISGTIDFVFGDALSIFQNCTFKVRKPMENQQCIVTAHGRKDRHEPTAIIIQGGSIVSDPSFYPVRLTNKAYLARPWKAYSRTIIMDAFIDDLITPDGYLPWQINLTNVGTTTCFYSEFNDRGPGSDKTKRANWPGVKTITAEHALDFTPFRFYKGDTWIKQTGVPYSPGALSSKSDSDIDH 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03276 598 SUPERFAMILY Pectin lyase-like 272 586 IPR011050 -
Bva13g03276 598 SMART PMEI_2 50 202 IPR006501 GO:0004857
Bva13g03276 598 ProSitePatterns Pectinesterase signature 1. 299 318 IPR018040 -
Bva13g03276 598 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 206 IPR035513 -
Bva13g03276 598 TIGRFAM PME_inhib: pectinesterase inhibitor domain 50 204 IPR006501 GO:0004857
Bva13g03276 598 CDD PMEI-like_3 57 207 - -
Bva13g03276 598 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
Bva13g03276 598 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 206 IPR035513 -
Bva13g03276 598 Gene3D - 269 587 IPR012334 -
Bva13g03276 598 PANTHER PECTINESTERASE 11 589 - -
Bva13g03276 598 Pfam Plant invertase/pectin methylesterase inhibitor 54 202 IPR006501 GO:0004857
Bva13g03276 598 PANTHER PECTINESTERASE 11 589 - -
Bva13g03276 598 Pfam Pectinesterase 274 573 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03276 Bva-Chr13 22694953 22697290 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03276 7 589 Carbohydrate Esterase AT3G05610 47.170 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03276 K01051 - gmx:100803527 716.842