Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03275 ATGGCCATCCTTACAGGGAACATACCCACAAGCATATTATTATGCATTGTGTTTCTTCTGACGAGCAGTTTGTGTAACAATGCTAATTCTGCAGCAACCTCGTCTTCGTCCTCATCCAGAGACACCTTTTGCAACCTTACACCTCATCCCATGTTTTGCAAATCCAATTCACCTTCTGCGACATCATGGGACATCCATGATTATTGTCGTTTTTTCGTAAACTCATCCTTGTCATTATCACTTAAGCTCGTTAAATATGTCATCAAGGGTCAATCTGGGTCTAATATCTCTTCATCCACCTTGCTTGCACTTAAAGATTGCCAGCTTCTAGGTGAACTCAGTGCAGATTACTTGTCAAGCACTTTGAGCAGCATCAATTCCACAAGCACCAACAGTAGCTCGTCACAGGCTGATGATTTGCAGACCTTGCTAAGTGCTACTATTACCAACATTGACACTTGCCTAGGCGGCCTTCAACAAGCAACTAATTCAAGCTCTGATTATCACTTGCAAAGCCTTCTTTCCAATGGCACCATGTTTCAGAGCATTTCTCTCGCATTTTTTAAACAGGGATGGGCAAGCACGGGAACGGGGAGAAAGCTAAGCGAAGGAGGATATCGTGCTTGGGAACAAAGGCTGTACGAGCTTATCAGAGCAAGTGGTAGAAAGCTGCTTCAGGCTCCTCCAGACAATGTGTTGGTGAGCCAAATGGTGGTTGTGAACCCAGATGGGTCTGCAAATTACACCACCATCAATGATGCAGTGAATGCTGCACCAAACAACACCGATGGTAGCAACGGTTTCTTTGTGATTTACGTGGTGGCTGGGACCTACGAAGAGTATGTATCCATTCCCAAAACCAACAAATACTTGATGATGATAGGAGATGGCATAAACCAGACTGTGATCACAGGAAATCGTAGCGTGGCTGGTGGCTGGACTACCTTCAACACTGCCTCGTtcgCCGTGGTGGCGAAAGGGTTTGTTGCAGTGAACATAACATTTCGTAACACGGCTGGAGCAATCAATGAGCAAGCAGTAGCTATGCGAAGTGGTGCTGACCTGTCTGCATTCTACTATTGTAGCTTTGAAGGATACCAAGACACTCTATATACTCATTCTATGAGGCAATTTTATAGAAACTGTGACATTTATGGTACAGTAGATTTCATATTTGGTAATGCAGCAGTTGTTCTCCAACAATGCAACATCTACCCGAGACTTCCGATGCAAGGACAATTCAATGCCATCACAGCACAGGGCCGCACTGATATCAATCAGAACACCGGAACCTCCATCCACAACTGCACCATCACGGCGGCGAGTGACTTAGCAGCCAGTAATGGCACTACAAAGACATATCTTGGAAGGCCATGGAAGCAATACTCACGAACAGTTTACATGCAATCTTTCATGGATAGTCTGATTGATCCTGCGGGTTGGAGAGAGTGGTCTGGCAGCTTTGCCTTGGACACCCTTTATTATGCAGAGTTTGATAACTGGGGACCTGGGTCAAACACAAGTAACAGAGTAACATGGCCAGGGTACCATGTCATTAATGCCACCGATGCTATCAATTTCACTGTCTCTAACTTTATACAAGGTGATGCGTGGCTGCCTGCAACCGGCGTGCTTTATGATGGCGGTTTACTCtg 1655 0.4526 MAILTGNIPTSILLCIVFLLTSSLCNNANSAATSSSSSSRDTFCNLTPHPMFCKSNSPSATSWDIHDYCRFFVNSSLSLSLKLVKYVIKGQSGSNISSSTLLALKDCQLLGELSADYLSSTLSSINSTSTNSSSSQADDLQTLLSATITNIDTCLGGLQQATNSSSDYHLQSLLSNGTMFQSISLAFFKQGWASTGTGRKLSEGGYRAWEQRLYELIRASGRKLLQAPPDNVLVSQMVVVNPDGSANYTTINDAVNAAPNNTDGSNGFFVIYVVAGTYEEYVSIPKTNKYLMMIGDGINQTVITGNRSVAGGWTTFNTASFAVVAKGFVAVNITFRNTAGAINEQAVAMRSGADLSAFYYCSFEGYQDTLYTHSMRQFYRNCDIYGTVDFIFGNAAVVLQQCNIYPRLPMQGQFNAITAQGRTDINQNTGTSIHNCTITAASDLAASNGTTKTYLGRPWKQYSRTVYMQSFMDSLIDPAGWREWSGSFALDTLYYAEFDNWGPGSNTSNRVTWPGYHVINATDAINFTVSNFIQGDAWLPATGVLYDGGLL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03275 551 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
Bva13g03275 551 PANTHER PECTINESTERASE 17 549 - -
Bva13g03275 551 Gene3D - 232 550 IPR012334 -
Bva13g03275 551 SMART PMEI_2 35 187 IPR006501 GO:0004857
Bva13g03275 551 Pfam Plant invertase/pectin methylesterase inhibitor 41 177 IPR006501 GO:0004857
Bva13g03275 551 SUPERFAMILY Pectin lyase-like 234 547 IPR011050 -
Bva13g03275 551 Pfam Pectinesterase 238 536 IPR000070 GO:0030599|GO:0042545
Bva13g03275 551 PANTHER PECTINESTERASE 17 549 - -
Bva13g03275 551 CDD PMEI-like_3 42 193 - -
Bva13g03275 551 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 190 IPR035513 -
Bva13g03275 551 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 190 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03275 Bva-Chr13 22692642 22694425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03275 11 551 Carbohydrate Esterase AT4G02330 53.659 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03275 K01051 - gmx:100801141 750.355