Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03269 ATGGGGCATTTCTCCGCTATGTTCAATGGGTTAGCAAGATCATTGAGGAAAGGGAAGAATTCTGGGAGATGCGGTGGGAGAGAAGCTGCAGAATCAATGGCAAAAGATGCCAAGAAAAATGACTTGATACTGTGTACATCGGGCATTGTTAGTGTTGATGGTTCAAACAACTTTGCCTCAGTTTTCTCCAAAAGAGGCAAGAAAGGAGTGAACCAGGATTGCTGCATAGTTTGGGAGGAATTTGGATGCCAAGCGGATATGATCTTCTGTGGAATATTTGACGGGCACGGGCCATGGGGTCACTTTGTGGCCAAAAGAGTAAGGGAGTCAATGCCAGCATCTTTGCTATGCAGCTGGCAGGAAACACTTGCTCAAACTTCGCTTGACCCAGATTTTGATTTGGAGGCAGAGAAAAAGCAACAGCTATTTAACATATGGAAGCATTCCTACTTGAAAACTTGTGCTGCCATTGATCAAGAACTAGAGCAGCAGAAACGCAAGATAGATTCATTCTACAGCGGAACAACAGCTCTATCAATTGTTAGACAGGGTAATCTGATTATAATAGCAAATGTGGGTGATTCTCGTGCTGTACTGGCTACAAGTTCAGATGATGGAAGCTTGGTGGCAGTTCAGCTGACAGTTGATTTCAAGCCCAATTTACCAGAGGAGGCTGAGCGAATCACCGAGTGCCAAGGGCGAGTGTTCTGCTTAAACGACGAACCAGGCGTGCATAGAGTGTGGCTACCAGACGAAGAGTCGCCTGGATTGGCAATGTCTAGAGCTTTTGGGGACTACTGTGTAAAAGATTATGGTCTGATTTCAGTCCCCGAAGTAACACACAGGAATATAACCAGCCAAGACCAATTTGTCGTCCTAGCAACAGATGGGGTGTGGGATGTAATTTCCAATCAAGAAGCAGTGGATATTGTATCTTCGGCACCAGACAGAGCAAAATCAGGTAGGCTTCTGGTGGATTGCGCAGTGCGTGCATGGAAACGCAAGAGGAAGGGCATTGCCACGGATGACATTTCAGCTATTTGTCTCTTCTTTCATTCTTACTCTTCATCTCATCAACATGCCACCCTTAAATA 1094 0.4543 MGHFSAMFNGLARSLRKGKNSGRCGGREAAESMAKDAKKNDLILCTSGIVSVDGSNNFASVFSKRGKKGVNQDCCIVWEEFGCQADMIFCGIFDGHGPWGHFVAKRVRESMPASLLCSWQETLAQTSLDPDFDLEAEKKQQLFNIWKHSYLKTCAAIDQELEQQKRKIDSFYSGTTALSIVRQGNLIIIANVGDSRAVLATSSDDGSLVAVQLTVDFKPNLPEEAERITECQGRVFCLNDEPGVHRVWLPDEESPGLAMSRAFGDYCVKDYGLISVPEVTHRNITSQDQFVVLATDGVWDVISNQEAVDIVSSAPDRAKSGRLLVDCAVRAWKRKRKGIATDDISAICLFFHSYSSSHQHATLK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03269 364 SUPERFAMILY PP2C-like 55 353 IPR036457 -
Bva13g03269 364 SMART PP2C_4 50 349 IPR001932 -
Bva13g03269 364 Gene3D - 45 353 IPR036457 -
Bva13g03269 364 PANTHER ALPHABET, ISOFORM E-RELATED 1 360 - -
Bva13g03269 364 CDD PP2Cc 57 351 IPR001932 -
Bva13g03269 364 Pfam Protein phosphatase 2C 83 314 IPR001932 -
Bva13g03269 364 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 360 - -
Bva13g03269 364 ProSiteProfiles PPM-type phosphatase domain profile. 58 351 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03269 Bva-Chr13 22666305 22669353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03269 1 352 PP2C-type Phosphatase Gene Family AT3G05640 71.067 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03269 - - gmx:100801309 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03262 04 26389458 26392261 Bva13g03269 13 22666305 22669353 BWGD