Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03262 ATGGCGACAGAGCATGCATTGTCATTCTCTGTTGTATCTGGGGTCGAAGATGTTCTTCAACAGCAAGGGAATCGATTGAGCGACATTGACTTAGCATCCAGAAAGGCAGAAGAACATTCATTGAGAAGATATGAAGCAGCAGAGTGGCTGCGAAAAACAGTTGGAGTTGTTGGAGGGAAAGATTTAGCAGCAGAGCCTTCTGAAGAAGAATTCAGGATTGGATTGCGCAGTGGGATCATCCTTTGCAATGCTATCAACAGAGTCCAGCCCGGAGCGGTGGCCAAGGTTGTAGAAGCTCCCGGCGATTCTCTTGTTGTTACAGACGGGGCAGCTCTGCATGCATTTCAGTACTTTGAAAATGTGAGGAATTTTCTTGTAGCTGTGGAGGAAATGGGTCTACCCACCTTTGAAGCTTCTGACTTAGAACAGGGAGGAAAATCTTCAAGGATAGTGAATTGTGTTCTGGCACTCAAGTGTTACAGTGAGTGGAAAAGCGGAGGCAAAAATGGGTCATGGAAATATGGTGTGAATCCAAAGCCACTTACCACTGGGAAGCCATTTCAGCGCAAGAACTCAGAACTATTCATTAACAATCTAGCAAAAGCGATTTCAAGTGACAATTGCTGGAACAGTGATAACTACAGTGATCCTGGGAATGGAGGGGGTTCCCCTACCTCTTTAAACGCGCTTGTTCGTGAATATTTGTCCGGCAAGAAGCAAGAAGAAATTCCCGTTGTAGTGGAAATCTTGCTTGGTAAAGTCATGAAGGAGTGTGAACGTCGCATGTCAATCCAACCTGAAGAGTTGAGAACAGCTTTAGAAGAAAGGGCAGCATCAGCAACAGAAAATTCAATGTCAAGAAATGCTTCTGATGATGAAGAGGATGCTCCGTCTGTTGACGAAGAGGTAAAGTTAGACTTCAACATAGACTCTCCGAagatggaagaaaagaaagatatacaGCATGTGCAAGaggaaaattatattcaaaaatataataatgatgaagaagaaagaagccaGCTTCTGAAGCAGAAACAGCTGGTCGAGCAACAAGAGCTTCTGAAGCAAAAACAGTTGGTTCAGCAACAAGAGCTTCTGAAGCAGAAACATTTGGTCgaacaacaacaaaaagacaTTCAGgaattaaaagaaatcctgCATGATACGAAATCAGGAATGTTGCTTTTGCAAAAAAGGTACCGGGAGGACTTCATCTGTCTAGGTAAGCACATGCGTGTTCTAGCTTCTACTGCTTCAGGATATCATAAAGTTCTTGAAGAAAACCGAAAGTTATACAATCAGGTGCAGGACCTGAAAGGAAATATTAGGGTATATTGCCGTGTTCGACCCTTATTCGGGCAACCAAGCCATCTTACCACAGTCAGTAACTTGGAAGAAGGAAATATCTCAATTATAACCCCTTCAAAATATGGAAAAGAGGGGAAGAAAGCATTTAGTTTCAACAAAGTTTTTGGTCCTACTGCAACACAAGCGGAGGTTTTCTCAGACATGCAGCCTCTTATTCGTTCTGTTCTTGACGGCTACAATGTCTGTATATTTGCTTATGGTCAGACAGGTTCGGGAAAAACTCATACTATGTCTGGACCAAACGAACTTACTGAGGAAACAGTTGGTGTCAACTACCGGGCACTGAGAGATCTTTTCCTTCTGTCAGAACAGAGAAAGGACACCATTTGCTATGATATATCCGTTCAGATGCTGGAAATTTACAATGAGCAAGTCAGAGATCTCCTTGCCACAGATGGTGCTTCTAACAAAAGATTAGAAATTCGGAACAGCTCTCAAAATGGAATTAATGTACCAGATGCAAACCTTATTCCAGTTTCATCAACATCAGATGTCATAAATCTGATGAACCTGGGGCATAAGAATCGTGCAGTAAGTTCTACAGCCATGAATGATCGGAGTAGTCGTTCTCATAgCTGCCTGACAGTTCATGTTCAAGGTAGGGATGTGACCTCTGGAAGTATTATTCGAGGTAGTATGCATCTTGTTGACCTTGCAGGAAGCGAAAGAGTAGATAAATCTGAAGTAACTGGCGATAGATTGAAGGAAGCAGTACACATCAACAAGTCTCTTTCTGCCCTTGGAGATGTAATTTCTGCGCTTGCTCAGAGGAGTTCACATGTTCCCTACAGAAACAGTAAACTGACCCAATTGCTTCAAGATTCTCTAgGAGGACAAGCAAAGACGCTCATGTTCGTTCATATCAGTCCTGAGCATGAAGCTCTTGGAGAAACACTTAGTACACTCAAGTTTGCTGAACGAGTCTCCACTGTTGAACTTGGAGCTGCCAAAGTTAACAAAGATAGCACAGATGTGAAAGAGCTTAAAGAACAGATTGCTTGTCTAAAGGCAGCCTTAGCCAGGAAGGAGGGAGAAACAGAACAGTTTCATCTATCTGGAAGTAGCAGTCCTGAAATACTTAAAGTGAAATTTCTTGGGTCTTCCCCATTACATCATAGTTTGGCATCTGGAGGTCAAAGGCAACTAAAAGATGATGCCAATGGCATGGAGggCCGAAATATACCTGGATCGAAGCTGAAAAGGCGAAGCCTTGATCTGCAGGACATTAGGAACGCACCACCATGGGCATCTGTTGGGAGTAGCAGCATGAAGTTAAAGGAAGATGATAAAGAATCCATTTCTGGAGATTGGGTCGACAAGAGAATGGTGAACAGGAATGACAGCTTAACCAGTGATGATAGCCTAGTGGGACAGTGGGAAGCAGAAAGCAAGCAGTTTTCGCCAATGCCTAGTCCAATGCTTAGTCCTAGTCCTGGTTATCTTTCAGACGCTTCAAAAATGACACAGCACAAAAAGGATAGCCAAGACCATGATGAAGTACATAGGAATCGGTATGAGATAGCCACCACAGATGACTCCCATGACCTTGAAATTGCAACCAGTGATTCTTCAGAATCAGACTTACATTGCCAAGTGCATATACCTAGATCAACCAGCATTCCCGGTGCAGTTGGGTCCAAACCTAAGAAATCAACTCAACCCAGACCATCAAAGGTCCCAGAATCCAGGAGTATGATCCCGTCATTGATTCCATCGCCATCAAGGAAACAAGGCACACTAGGCAGTCAATCCAAAAAGCAGGCAGGTGCAGGTGATGGGAAGAGAAGAAGTGGAATTGCCAAGTG 3176 0.4225 MATEHALSFSVVSGVEDVLQQQGNRLSDIDLASRKAEEHSLRRYEAAEWLRKTVGVVGGKDLAAEPSEEEFRIGLRSGIILCNAINRVQPGAVAKVVEAPGDSLVVTDGAALHAFQYFENVRNFLVAVEEMGLPTFEASDLEQGGKSSRIVNCVLALKCYSEWKSGGKNGSWKYGVNPKPLTTGKPFQRKNSELFINNLAKAISSDNCWNSDNYSDPGNGGGSPTSLNALVREYLSGKKQEEIPVVVEILLGKVMKECERRMSIQPEELRTALEERAASATENSMSRNASDDEEDAPSVDEEVKLDFNIDSPKMEEKKDIQHVQEENYIQKYNNDEEERSQLLKQKQLVEQQELLKQKQLVQQQELLKQKHLVEQQQKDIQELKEILHDTKSGMLLLQKRYREDFICLGKHMRVLASTASGYHKVLEENRKLYNQVQDLKGNIRVYCRVRPLFGQPSHLTTVSNLEEGNISIITPSKYGKEGKKAFSFNKVFGPTATQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPNELTEETVGVNYRALRDLFLLSEQRKDTICYDISVQMLEIYNEQVRDLLATDGASNKRLEIRNSSQNGINVPDANLIPVSSTSDVINLMNLGHKNRAVSSTAMNDRSSRSHSCLTVHVQGRDVTSGSIIRGSMHLVDLAGSERVDKSEVTGDRLKEAVHINKSLSALGDVISALAQRSSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEHEALGETLSTLKFAERVSTVELGAAKVNKDSTDVKELKEQIACLKAALARKEGETEQFHLSGSSSPEILKVKFLGSSPLHHSLASGGQRQLKDDANGMEDIRNAPPWASVGSSSMKLKEDDKESISGDWVDKRMVNRNDSLTSDDSLVGQWEAESKQFSPMPSPMLSPSPGYLSDASKMTQHKKDSQDHDEVHRNRYEIATTDDSHDLEIATSDSSESDLHCQVHIPRSTSIPGAVGSKPKKSTQPRPSKVPESRSMIPSLIPSPSRKQGTLGSQSKKQAGAGDGKRRSGIAK 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03262 1041 Coils Coil 366 393 - -
Bva13g03262 1041 CDD KISc_C_terminal 440 770 - -
Bva13g03262 1041 Pfam Kinesin motor domain 449 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03262 1041 ProSiteProfiles Kinesin motor domain profile. 442 768 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03262 1041 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 1034 - -
Bva13g03262 1041 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 442 804 IPR027417 -
Bva13g03262 1041 MobiDBLite consensus disorder prediction 984 999 - -
Bva13g03262 1041 SMART ch_5 42 160 IPR001715 GO:0005515
Bva13g03262 1041 PRINTS Kinesin heavy chain signature 515 536 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03262 1041 PRINTS Kinesin heavy chain signature 718 739 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03262 1041 PRINTS Kinesin heavy chain signature 669 687 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03262 1041 PRINTS Kinesin heavy chain signature 638 655 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03262 1041 Gene3D - 33 162 IPR036872 -
Bva13g03262 1041 ProSitePatterns Kinesin motor domain signature. 668 679 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bva13g03262 1041 SMART kinesin_4 440 776 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03262 1041 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 1034 - -
Bva13g03262 1041 MobiDBLite consensus disorder prediction 926 962 - -
Bva13g03262 1041 Coils Coil 422 442 - -
Bva13g03262 1041 MobiDBLite consensus disorder prediction 1007 1026 - -
Bva13g03262 1041 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Bva13g03262 1041 Pfam Calponin homology (CH) domain 42 159 IPR001715 GO:0005515
Bva13g03262 1041 Coils Coil 325 352 - -
Bva13g03262 1041 SUPERFAMILY Calponin-homology domain, CH-domain 42 173 IPR036872 -
Bva13g03262 1041 Coils Coil 775 802 - -
Bva13g03262 1041 Gene3D Kinesin motor domain 437 809 IPR036961 -
Bva13g03262 1041 MobiDBLite consensus disorder prediction 274 301 - -
Bva13g03262 1041 MobiDBLite consensus disorder prediction 903 1041 - -
Bva13g03262 1041 MobiDBLite consensus disorder prediction 849 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03262 Bva-Chr13 22634098 22639695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03262 372 804 Calmodulin-binding Proteins AT5G65930 39.101 4.83e-78 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03262 K10406 - gmx:100799535 1227.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03262 13 22634098 22639695 Bva04g03257 04 26353929 26359282 ECH
Bva13g03262 13 22634098 22639695 Bva13g03262 13 22634098 22639695 ECH