Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03256 ATGTCGTATAGACCTACTGGTAACTCGAGGACTGAGGTTCGCCGGAACCGATACAAGGTGGCCGTAGATGCTGAAGAAGGTCGGAGACGCCGAGAGGATACCATGGTCGAGATCCGGAAGAACCGTAGAGAGGAGAGTTTACTAAAGAAGAGGCGCGAGGGCCTCCAAGCTCAGCAGATGCCTGCTTCAATTCACGCAACTGCAGTAGAAAAGAAGCTGGAACACCTACCTACCATGGTTGCAGGTGTTTGGACGGACGATAGTAATCTTCAGCTTGAGGCAACGACTCAATTTCGAAAGTTGCTTTCAATTGAACGTAGTCCACCTATTGAGGAGGTCATACAATCTGGTGTAGTTCCCCGCTTTGTAGAATTTTTGATGAGGGAAGATTTTCCACAGCTGCAGTTTGAAGCAGCTTGGGCTTTGACCAATATAGCTTCTGGAACATCTGAAAACACCAAGGTGGTAATTGATCATGGGGCTGTCCCAATTTTTGTCAAACTCCTTGGCTCCCCAAGCGATGATGTTCGTGAGCAGGCAGTGTGGGCGTTGGGAAATGTTGCTGGGGATTCTCCCAGATGCCGTGATCTTGTTCTCAGTCATGGGGCGTTGGTTCCTCTTTTGTCACAATTAAATGAACACGCCAAGCTTTCTATGCTCAGAAATGCTACTTGGACTCTTTCAAACTTCTGCAGGGGCAAGCCACAGCCTCCTTTTGATCAGGTTAAACCTGCGCTTCCTGCTCTTGCCCATCTTATTCATTCAAATGATGAAGAAGTATTGACGGATGCCTGTTGGGCACTTTCATATCTTTCTGATGGcacaaatgataaaattcaaGCTGTGATTGAATCTGGTGTATGTGCTCGTCTTGTTGAACTTTTACTGCACCCTTCCCCTTCGGTGCTCATTCCTGCTCTTCGCACAGTTGGAAATATTGTTACAGGAGATGATGTCCAGACTCAGGTTATCATCAACCATCAAGCTCTTCCATGCCTTCTAAGTCTGTTGactaacaattttaaaaaaagtatcaaGAAGGAAGCTTGTTGGACCATATCAAATATCACAGCTGGGAATAAACAGCAGATTCAGtCTGTCATTGAGGCCAATATCATTGGTCCTCTCGTTGTGCTGCTTCAAACTGCTGAGTTTGATATTAAGAAAGAGGCTGCTTGGGCTATCTCAAATGCTACATCTGGTGGTTCTCATGAACAAATCAAGTACCTGGTAAGTCAGGGGTGTATTAAACCCTTATGTGATCTTCTCATCTGTCCAGATCCTAGGATTGTAACAGTATGTCTGGAAGGGCTTGAAAACATCTTGAAGGTAGGAGAAGCTGATAAAAATGCAGGCAATAGTGGTGGTGTGAATCTATATGCCCAAATGATCGATGATGCTGAGGGGTTGGAGAAAATTGAGAACCTTCAGAGTCATGACAACACTGAGATTTATGAAAAGGCCGTTAAGATTCTTGAGACATATTGgttggaggaagaagatgagacTATGCCTCCTGGTGATGCTTCCCAAACTGGGTTCAACTTTGGTGGCTCTGAGATTCCTGCTGTACCTTCTGGTggattcaattttaatta 1598 0.4349 MSYRPTGNSRTEVRRNRYKVAVDAEEGRRRREDTMVEIRKNRREESLLKKRREGLQAQQMPASIHATAVEKKLEHLPTMVAGVWTDDSNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVEFLMREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSPRCRDLVLSHGALVPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVKPALPALAHLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIESGVCARLVELLLHPSPSVLIPALRTVGNIVTGDDVQTQVIINHQALPCLLSLLTNNFKKSIKKEACWTISNITAGNKQQIQSVIEANIIGPLVVLLQTAEFDIKKEAAWAISNATSGGSHEQIKYLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKNAGNSGGVNLYAQMIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEEDETMPPGDASQTGFNFGGSEIPAVPSGGFNFN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03256 532 PANTHER IMPORTIN ALPHA 3 522 - -
Bva13g03256 532 SUPERFAMILY ARM repeat 10 501 IPR016024 -
Bva13g03256 532 Pfam Importin beta binding domain 14 96 IPR002652 GO:0006606|GO:0061608
Bva13g03256 532 Gene3D - 74 497 IPR011989 -
Bva13g03256 532 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 117 160 IPR000225 GO:0005515
Bva13g03256 532 Pfam Armadillo/beta-catenin-like repeat 317 358 IPR000225 GO:0005515
Bva13g03256 532 Pfam Armadillo/beta-catenin-like repeat 404 441 IPR000225 GO:0005515
Bva13g03256 532 Pfam Armadillo/beta-catenin-like repeat 245 272 IPR000225 GO:0005515
Bva13g03256 532 Pfam Armadillo/beta-catenin-like repeat 191 232 IPR000225 GO:0005515
Bva13g03256 532 Pfam Armadillo/beta-catenin-like repeat 276 314 IPR000225 GO:0005515
Bva13g03256 532 Pfam Armadillo/beta-catenin-like repeat 107 147 IPR000225 GO:0005515
Bva13g03256 532 Pfam Armadillo/beta-catenin-like repeat 149 188 IPR000225 GO:0005515
Bva13g03256 532 Pfam Armadillo/beta-catenin-like repeat 360 399 IPR000225 GO:0005515
Bva13g03256 532 PANTHER IMPORTIN SUBUNIT ALPHA 3 522 - -
Bva13g03256 532 Gene3D - 12 52 IPR036975 GO:0006606
Bva13g03256 532 PIRSF Importin_alpha 6 531 IPR024931 GO:0005737|GO:0006606|GO:0061608
Bva13g03256 532 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 244 286 IPR000225 GO:0005515
Bva13g03256 532 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 160 202 IPR000225 GO:0005515
Bva13g03256 532 ProSiteProfiles IBB domain profile. 1 60 IPR002652 GO:0006606|GO:0061608
Bva13g03256 532 Pfam Atypical Arm repeat 458 504 IPR032413 -
Bva13g03256 532 SMART arm_5 149 189 IPR000225 GO:0005515
Bva13g03256 532 SMART arm_5 190 232 IPR000225 GO:0005515
Bva13g03256 532 SMART arm_5 234 273 IPR000225 GO:0005515
Bva13g03256 532 SMART arm_5 403 443 IPR000225 GO:0005515
Bva13g03256 532 SMART arm_5 275 315 IPR000225 GO:0005515
Bva13g03256 532 SMART arm_5 106 147 IPR000225 GO:0005515
Bva13g03256 532 SMART arm_5 317 358 IPR000225 GO:0005515
Bva13g03256 532 SMART arm_5 360 400 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03256 Bva-Chr13 22605391 22610060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03256 239 465 U-box Gene Family AT2G23140 23.684 3.88e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03256 K15042 - gmx:100789135 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03252 04 26328277 26334136 Bva13g03256 13 22605391 22610060 BWGD
Bva13g03256 13 22605391 22610060 Bva04g03252 04 26328277 26334136 ECH
Bva05g01311 05 6899698 6903214 Bva13g03256 13 22605391 22610060 ECH
Bva13g03256 13 22605391 22610060 Bva13g03256 13 22605391 22610060 ECH