Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03254 ATGCCAAGCCAACGTAACAAAGCCATTCCCATTCCAATCTTATTCCGTACACAGTCTGCAGTTCCCTTTCCATTTTCGGGTGTTGAAAGCAAACTTGAGGTTCAAGTGCAGGAATCATGGACGAGTTCAGACTTGAGAGAAGACCAGCAAGAGCAAGGACGGTACTCTTGTTTCTGTGCTCAACAACTGCACAAGAACCGTATCGAAATCGGATTCATCCATCAATGCTCATGGCAGCAATCTGCAATTAAAAGCCTTGAATCATGGGAGTACGGAATTGCGATCATGCCCAGAAACTTGCCACGTCCAGAACCGCAGCTAAAGGCATGCAAACGAACCTTAAACTACGCGAGAGGGTGGTGCAGAAACAATTCATACTCATTACCAGGAAATGAAGTTCTAACTTCTCAGAAAGTTCCGATGCGGGAAAATCGGAAATCCGACAGGGAAGGCGATGACAGGAATCCTGAGATTCCAGTGGAGCATTCAAAACGTAGATACGAAGAATCAGAAGTACAGATACCGATGTGCGTCATTGGAAATTTGAGGATTGTAGTAACCAGTAGGGCGCTTAACTCCAGCATCGGGGGTTTAGTTAGAAGACTGGTTCGAGAGGCGCTCCAGCGTCACAgTCTAACTGTTCATCATATTGGAACATCTGGGACCAAGCCAATACAGTTGCGTTTTGCTAATAAAGTGGCTTCTACTTATACAAGATCACAGATAAAATCTGAGGAAGATGAATTTATCCGGATTGAGCTTATGGATGCTAGATCTCAATCTGTAATCACAGTTGGTGACCTAGCCTCTAAGAAGATAAAGTTATATGTGCTTAAAGGTGAGTTTGGCTCCGAGGATTGGTCTGATGACCAATTTGATGACAATATCTTACCTCCAAGAGAGGGTAGAGAGCCACTGTTAAAGGGGGAAATTCTCATTAATCTACAAAATGGAGTCGCTACTATCAGGAACCTTGAGTTGACTGATAACTCCCGCTGGACCAGAACTGGAAAGTTCCGGTTAGGAGCCAGAGTTGCAGGATCAACTCCCCATGGAGAAGACATCAGGGAGGGCATCAGTGAACCTTTTAGGgttaaagagaaaagaggaaagGATAGAAAGAAGCGTAATCGTCCATCCTCGAGGTCGGTGGCAGGTGAAGAAGCTGGACAACGTAGTGGGACAGATCAAGATCTGCAACAAAACTTCCTAACTGCGCACCAAGATCAACTGGAAACATTTCCAGATTTTGGGCAACCATCCACCTCAACTATGTATGACCAATTCAATCCTGATTCACTTGCTGGGTCTGGAGGAATATTGCCACAACACGGTTGTGTAGGGGGAGGGCTGTTGACGGGAACGTACAATATTGAAGAGAATCACTGGACCCCCATTGGATCAGAGTTTCCAGTTGCGCCTGATAGCTATTCAACATGGGTCTCCTCAGGAGATTTTAATCCTTGTAATGGAGCAGAATTTGGCATCCGTTCTTCTTTCCACAACTCTTGCATGGATATATCAAAGACCAGGAGAGTGTGGTATAAGATTAAGAATGCTTTCAAGTGGGTCAACTCAGTCAGACGGGAAGCAGCTGCCAAAAGGAGGATCCGTGGCAAAGCCATTTTACCATA 1634 0.4468 MPSQRNKAIPIPILFRTQSAVPFPFSGVESKLEVQVQESWTSSDLREDQQEQGRYSCFCAQQLHKNRIEIGFIHQCSWQQSAIKSLESWEYGIAIMPRNLPRPEPQLKACKRTLNYARGWCRNNSYSLPGNEVLTSQKVPMRENRKSDREGDDRNPEIPVEHSKRRYEESEVQIPMCVIGNLRIVVTSRALNSSIGGLVRRLVREALQRHSLTVHHIGTSGTKPIQLRFANKVASTYTRSQIKSEEDEFIRIELMDARSQSVITVGDLASKKIKLYVLKGEFGSEDWSDDQFDDNILPPREGREPLLKGEILINLQNGVATIRNLELTDNSRWTRTGKFRLGARVAGSTPHGEDIREGISEPFRVKEKRGKDRKKRNRPSSRSVAGEEAGQRSGTDQDLQQNFLTAHQDQLETFPDFGQPSTSTMYDQFNPDSLAGSGGILPQHGCVGGGLLTGTYNIEENHWTPIGSEFPVAPDSYSTWVSSGDFNPCNGAEFGIRSSFHNSCMDISKTRRVWYKIKNAFKWVNSVRREAAAKRRIRGKAILP 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03254 544 MobiDBLite consensus disorder prediction 344 396 - -
Bva13g03254 544 MobiDBLite consensus disorder prediction 131 165 - -
Bva13g03254 544 MobiDBLite consensus disorder prediction 350 368 - -
Bva13g03254 544 PANTHER CALMODULIN-BINDING PROTEIN 141 380 - -
Bva13g03254 544 Pfam Calmodulin binding protein-like N-terminal domain 225 367 IPR046831 -
Bva13g03254 544 PANTHER OS02G0177800 PROTEIN 141 380 IPR012416 GO:0005516
Bva13g03254 544 MobiDBLite consensus disorder prediction 139 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03254 Bva-Chr13 22594398 22600528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03254 164 380 Calmodulin-binding Proteins AT5G62570 33.772 4.89e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03254 - - gmx:100798493 190.66