Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03247 ATGAGAATGGAAGTAGAGAAAAGAAGGTCCAAGGGAAGCTTCCTCAACTTGTTTGATTGGAATGGAAAATCTCGAAAGAAGCTGTTCTCCGACACTCCTAACTTATCTGAAGATCcaagacaaggaaaagaaaatgaggagaACATGCCGAAGTCACAGCACCATAGGATAAAGGTGGATGAGAATGGAGCAAGCCCGAGCATAGGAAGTTGTGACTTTAACTGTGCGTTATCAATTAGTGATGAAGGATGTGGGACTAAAGCCCCTGGGCTCGTAGCGAGACTCATGGGTTTGGAGGCATTGCCAGCTTCAACAGTTGCTGAGCTCTCTTCGGCAGCATTATATGGTACTAACTCTCTTAGATCTTATCACTCTCATGAGGATACTCTCGTGCCTTTGAGTGACTATCATCCTGCGGACTACATAAACATGCCACATAAGCTGGGGAAGTCTTCTTGTGACGCCATGGAATCAAGGGCACAGAAGGTGCATAATCGCCCAATTAAAAGATTTCAAACTGAAACGTTGCCTCCAAAGTCAGCTAAACCAATTCCAGTTACTCATAATAAATTGCTGTCTCCTATCAAGAGTCCTGGTTTTATCCCAGCACAGAATGCAGCTCACATAATGGAGGCAGCTTCTAGGATAATTGAGGCCAGCCCTCGAGCATGTATGAAGAATAAAATGTCATCAGTTGGGTCTTCATCTATTCCCTTGAGAATTCTTgatttgaaagagaaattggAAGCTGCACAGTGTGCATCCTTGTGTAGAAAACTTGTGGATCCAAGCACTGCCAATCCTTCGAAAGATAAGACTAGTGACAAGAGtaatagtatatataattGCTCTCCGGCATTGAAGGGTTCAAGAGATTCAGCAAAGAGTAGTTCTCACCGGTTAGGTGGTAAAGGCAAATCAGTTTCACTTGCAACACAAGTCAAGGCAAATGTTGATGGCAAAGattcttcaacttcaaatgGCAATAGGGACTATAGGAAAACGAAAGAACAGAAGCAGATCAAATCAAACCAGTTCTCTGAGTATCAGAGACCTATTATACAGCAAGCCATGCAGCGGAGAACTCATACTAACCAGAAATACAATGTGCTGGGGCAGAATAATCAGAAGCAGAATAGTGTTTCTAAAAAAGGTAAATCAACTTCAAAAGATTCAGAATCCAACAAGCCAGCTACACGAACAAGGTCATTGGAAAGTTCCATTGGGTCAAGCAAGATGAAAAGTGAGTGTACCCTAAACACCAATATTAGGGCTAAAAGGTCAAGCAGAAGGGCAGCTGATTCTCAAACGGAGTCTTCACCATCCAAAACAAAGAACCattcccaaaagaaaaggtatACTGGCAGGGATGTTCTTATTGAGACAAGAGTTACTGATAATGCGGTAAATAATTATGAAGGTAAGTCCATAAAATGCAATATTACAACTGACAGTATGAATAGGGAGGCATTTAATATGAATGAAAGCAAGGAAGTCATTTCATTTACATTCACATCGCCCTTGAGAAGAAGCATGGTTGAGCCACAGTCCTCTGCTCAAGTGATGGGAACAAAAAACAGCATAGATATGGATTCTCCTGTTCATAATGATAAGCCTTATCCGAAAAAGTTATCACTATCTCCTCCTGGGTTACACATGGTAGATGGTGATGCTTTAAGTACCCTGTTGGAGAAAAAGCTGCAAGAATTGACATCTAGAATTAACTCATCTCAATGCACACTGGCTATGGAGGGATCTTCTGCTGGTTTTAGGTCAAGTTTGGAAGACAAAGTTCACACTCTGGTAGGCATTGAATCAAGGGAACAAAACAGAAGCTTCCACCCTGATCTACTCTGTGATAAAGTGGACAGCATGTACGACGGTGATTGTTCTTCAAGTGTCGATCTTTTGGTTAGCATGAATCAACTGGAGGGATCAGAGGCACTGGAAGAGCATATTTGTAGCGGCAACAGCGAAACTGGAAATAGACAAGGTTCTCAACATTCCAGAGCAGTTACAATTTTTGAAACTCCTTTGGTCAATGAAAGTTACTTGGCTAGTGAAGACAGTACATATGGTAGCACAGTTTATTCATCCATGCAAGACGAAGAGGTATCGAACTTCTTTCCAATAAATGAATCTGTGCCACCTGAAGGTGAGGTGAATTCGTATGAAGGGAGCTCTTCCACATTGTCTGAGAAAATGACCCTTAAACAATCAAGtggaaaatcaaatttgaaacatTATAAGAAATCATGGAACTTGGAACTTGAATATGTAAAGGATATAATTAGCAATGCAGAGCTGATGGCCGAAGATTTTGTGCTGGGTCAAACCGATGAGGTTGTAATGCCAAATCTCTTTGATTTGTTGGAGAATAGGGGCAAGGTAACCGAAAACTATGAAGAGTTTTCCAAGCTCGATAGAAAGGTTCTGTTTGACTGTCTATGCGAGTGCCTAGAATCGAGATGCACTCAAACTTTTGTTGGAAGGTGCAAAGGATGGCTTAGATGGGTGACATTAGTTCAGAGGAAGGAGTGGTTGGCAGAAGATTTGCACGCGGAGATGTTGGGCTTTAAAAGAATGGAAGAGGTGATGGAGGATGAGCTTGTGCACAAGGACATGAGCACTGGATATGGGAGATGGCTTGATTTTGGCATTGAAGCCTTCGAAGAGGGTTTAGAGCTTGAGCGTGACATATTAACTTGTTTGATTAACGAATTGGTTTCGGATTTGTTTCTCGCTTA 2747 0.4037 MRMEVEKRRSKGSFLNLFDWNGKSRKKLFSDTPNLSEDPRQGKENEENMPKSQHHRIKVDENGASPSIGSCDFNCALSISDEGCGTKAPGLVARLMGLEALPASTVAELSSAALYGTNSLRSYHSHEDTLVPLSDYHPADYINMPHKLGKSSCDAMESRAQKVHNRPIKRFQTETLPPKSAKPIPVTHNKLLSPIKSPGFIPAQNAAHIMEAASRIIEASPRACMKNKMSSVGSSSIPLRILDLKEKLEAAQCASLCRKLVDPSTANPSKDKTSDKSNSIYNCSPALKGSRDSAKSSSHRLGGKGKSVSLATQVKANVDGKDSSTSNGNRDYRKTKEQKQIKSNQFSEYQRPIIQQAMQRRTHTNQKYNVLGQNNQKQNSVSKKGKSTSKDSESNKPATRTRSLESSIGSSKMKSECTLNTNIRAKRSSRRAADSQTESSPSKTKNHSQKKRYTGRDVLIETRVTDNAVNNYEGKSIKCNITTDSMNREAFNMNESKEVISFTFTSPLRRSMVEPQSSAQVMGTKNSIDMDSPVHNDKPYPKKLSLSPPGLHMVDGDALSTLLEKKLQELTSRINSSQCTLAMEGSSAGFRSSLEDKVHTLVGIESREQNRSFHPDLLCDKVDSMYDGDCSSSVDLLVSMNQLEGSEALEEHICSGNSETGNRQGSQHSRAVTIFETPLVNESYLASEDSTYGSTVYSSMQDEEVSNFFPINESVPPEGEVNSYEGSSSTLSEKMTLKQSSGKSNLKHYKKSWNLELEYVKDIISNAELMAEDFVLGQTDEVVMPNLFDLLENRGKVTENYEEFSKLDRKVLFDCLCECLESRCTQTFVGRCKGWLRWVTLVQRKEWLAEDLHAEMLGFKRMEEVMEDELVHKDMSTGYGRWLDFGIEAFEEGLELERDILTCLINELVSDLFLA 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03247 915 MobiDBLite consensus disorder prediction 368 383 - -
Bva13g03247 915 MobiDBLite consensus disorder prediction 368 455 - -
Bva13g03247 915 MobiDBLite consensus disorder prediction 266 292 - -
Bva13g03247 915 MobiDBLite consensus disorder prediction 399 426 - -
Bva13g03247 915 PANTHER DUF4378 DOMAIN PROTEIN 3 914 - -
Bva13g03247 915 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 3 914 - -
Bva13g03247 915 Pfam Domain of unknown function (DUF4378) 756 907 IPR025486 -
Bva13g03247 915 MobiDBLite consensus disorder prediction 513 549 - -
Bva13g03247 915 MobiDBLite consensus disorder prediction 262 351 - -
Bva13g03247 915 MobiDBLite consensus disorder prediction 513 530 - -
Bva13g03247 915 MobiDBLite consensus disorder prediction 25 56 - -
Bva13g03247 915 MobiDBLite consensus disorder prediction 384 398 - -
Bva13g03247 915 MobiDBLite consensus disorder prediction 310 325 - -
Bva13g03247 915 MobiDBLite consensus disorder prediction 326 341 - -
Bva13g03247 915 Pfam DUF761-associated sequence motif 79 106 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03247 Bva-Chr13 22562413 22567443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03247 5 912 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 33.946 9.84e-117 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03247 - - gmx:100804688 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03249 04 26314236 26319029 Bva13g03247 13 22562413 22567443 BWGD
Bva13g03247 13 22562413 22567443 Bva04g03249 04 26314236 26319029 ECH
Bva13g03247 13 22562413 22567443 Bva13g03247 13 22562413 22567443 ECH