Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03244 ATGTCTCACACCAGCAACAATGTCTCTGGGGTTGACAACACATTCAGAAGGAAATTCGACCGAGAGGAGTATTTGGAAAGAGCTCGAGAGCGTGAGAGGCAGGAGGAGGAAGTACGATCTAAGCCCAAAGGGCCTCCGGTGCAGAGGAAACCCTTGAAGCATAGAGATTATATTGTAGACCTTGAGTCCCGCTTAGGGAAGACTCAGGTTGTTACGCCAGTTGCGCCACTAAGCCAGCAGGCTGGATACTACTGCTCAGTTTGTGAGTGTGTGGTGAAGGATTCTGCAAACTATTTGGATCATATCAATGGAAAGAAACATCAAAGAGCTCTGGGCATGTCTATGCGAGTAGAACGTGCTTCTCTTAAGCAGGTTCAGGAACGATTTGATAATCTTAAAAAACGTAAAGATGTTGGCAGCTTCACAGAGCAAGATCTTGATGAACGGATTTTAAAACAGCaacaagaagaggaagaaagaaagcgACAgcggaaagaaaggaaaaaagagaagaagaAGGAGAAGGCAgctgaagaagaagctgaaatAGATCCTGATGTTGCAGCTATGATGGGCTTCGGGGGTTTCCGGTCATCCAAGAAGTA 605 0.4083 MSHTSNNVSGVDNTFRRKFDREEYLERARERERQEEEVRSKPKGPPVQRKPLKHRDYIVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLKQVQERFDNLKKRKDVGSFTEQDLDERILKQQQEEEERKRQRKERKKEKKKEKAAEEEAEIDPDVAAMMGFGGFRSSKK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03244 201 Coils Coil 148 182 - -
Bva13g03244 201 Coils Coil 21 41 - -
Bva13g03244 201 MobiDBLite consensus disorder prediction 145 164 - -
Bva13g03244 201 SMART ZnF_U1_5 80 114 IPR003604 GO:0003676|GO:0008270
Bva13g03244 201 MobiDBLite consensus disorder prediction 145 201 - -
Bva13g03244 201 Gene3D Classic Zinc Finger 77 115 - -
Bva13g03244 201 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 7 201 IPR040107 GO:0000398|GO:0005681
Bva13g03244 201 SUPERFAMILY beta-beta-alpha zinc fingers 78 121 IPR036236 -
Bva13g03244 201 Pfam Zinc-finger of C2H2 type 83 107 - -
Bva13g03244 201 MobiDBLite consensus disorder prediction 27 54 - -
Bva13g03244 201 Coils Coil 115 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03244 Bva-Chr13 22548174 22550949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03244 4 145 C2H2 Transcription Factor Family AT3G05760 79.021 2.11e-81 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva13g03244 zf-C2H2_jaz 1.8e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03244 K12848 - gmx:100795833 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03244 13 22548174 22550949 Bva13g03244 13 22548174 22550949 ECH