Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03236 ATGGGTTGCCAAGAAGAATTGTTGATTGAAAAAGTTTGCGAGCTCTATGACCAAATTTCAAGCCTAGAGAGTCTGAAACCTTGCAAAAATGTCGACATGCTCTTCACCCAACTCGTCCTCACATGCATGCCACCTAGCCCCATCGATGTCACCAACCTCCCAAAAAGGGTTCAAGACATCAGATCCAAGCTTATAAGGCTCTGTGGCGAAGCCGAGGGACTCTTGGAGTCTCACTACTCAGCCATCTTAGGCTCCTATGACAACCCACTTGACCATCTCCACATTTTCCCTTACTATACCAATTACCTCAAGCTTGGCCTCCTTGAATTCACTATCCTCAGTCAACACTGTGCCCATGTCCCCAGCAAAATTGCCTTTGTGGGTTCTGGTCCTCTTCCCTTCACTTCCATTGTTTTGGCCTCCAACCACTTACCCACCACCACTTTTCACAACTATGACTTGGACACATTAGCCAATTCCCAAGCTCTGCGCTTGGTTGAATCCGATCCTGATTTGTCAAAGCGCATGGTTTTCCACACCAGTGATATATTGGATGTGACAAACACTTTGAAAGATTATGAGGTTGTTTACTTGGCAGCACTTGTGGGCATGGACAAAGAGGAAAAGGGTCGAATCATTGATCACTTGGCCAAGCACATGGCTCCCGGAGCCTTTCTCATGCTGAGGAGTGCACACGGTGCTCGTGCTTTTCTCTACCCTGTGGTTGAACCTAGTGATCTTCATGGGTTTGAGGTTCTTTCTATCTTCCATCCCACTGATGAGGTTATTAACTCTGTGCTCATAGCACGTAAATATCCAATGCCTGTACACTCACTTGATCAAGGACTTGGCTCTATGATACTTCCAAACAAGTGCTCTGAGATTGAAGCTTTCAATCCCCTCAACCATGGCAATATGATCGAGGAATTGGCATTTGAAGAGCAATCATCGTA 953 0.4607 MGCQEELLIEKVCELYDQISSLESLKPCKNVDMLFTQLVLTCMPPSPIDVTNLPKRVQDIRSKLIRLCGEAEGLLESHYSAILGSYDNPLDHLHIFPYYTNYLKLGLLEFTILSQHCAHVPSKIAFVGSGPLPFTSIVLASNHLPTTTFHNYDLDTLANSQALRLVESDPDLSKRMVFHTSDILDVTNTLKDYEVVYLAALVGMDKEEKGRIIDHLAKHMAPGAFLMLRSAHGARAFLYPVVEPSDLHGFEVLSIFHPTDEVINSVLIARKYPMPVHSLDQGLGSMILPNKCSEIEAFNPLNHGNMIEELAFEEQSS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03236 317 PANTHER NICOTIANAMINE SYNTHASE 3 1 316 IPR004298 GO:0030410|GO:0030418
Bva13g03236 317 PANTHER SYNTHASE, PUTATIVE-RELATED 1 316 - -
Bva13g03236 317 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Bva13g03236 317 Gene3D Vaccinia Virus protein VP39 5 273 IPR029063 -
Bva13g03236 317 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03236 Bva-Chr13 22525269 22526719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03236 1 311 Nicotianamine Synthase Gene Family AT5G04950 62.145 4.47e-141 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03236 K05953 - gmx:100794250 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03236 13 22525269 22526719 Bva13g03236 13 22525269 22526719 ECH