Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03228 ATGGCGTCTTTCGAATCAAACTCGGATTCTAGTAATTCCGACACGTTGCCAGAATCCAACCAGAAAAAGCGCAGAAAAATCGGACACAGCTTTGAAGATCAATATTCAGCCTCTCAGATTCGATGGAGATCCGAGACAGAGGAACAGATCTACTCCTCCAAGCTCGTCGAAGCTCTCAGGCGGGTTCTTCGCCGAAATCCTTCATCAGCGGCCAATTCTAGTAGAAGTCGTGAAGTTCGCGACACCGCAAACAGAGTTCTAGCCGTGACCGCCAAAGGAAGGACTCGGTGGAGTAGAGCGATTCTGGCCACTCCACTCAGCAAGTGGAGGTTCCTGAGGCAGCATAAGAAGGTGAAAAAGGTCTCCAACGGATTGCAGAAACCGGTAATTAGGAGGGAGAAAAGGAAGTTACCTGCTACGCAGAAGAAAGTCCGCGTTCTCAGCCGGTTAGTTCCCGGTTGCCGGAAAGTTTCATTTCCGAATCTTCTGGAAGAAGCCACCGATTACATTTCCGCCTTAGAGATGCAAGTTCGAGCCATGACCGCACTGACCGAGATACTCAACGGTGGAGCGCCGGGCGATCGGCTCGGGTGGACTCGACCGTG 605 0.5174 MASFESNSDSSNSDTLPESNQKKRRKIGHSFEDQYSASQIRWRSETEEQIYSSKLVEALRRVLRRNPSSAANSSRSREVRDTANRVLAVTAKGRTRWSRAILATPLSKWRFLRQHKKVKKVSNGLQKPVIRREKRKLPATQKKVRVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALTEILNGGAPGDRLGWTRP 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03228 201 MobiDBLite consensus disorder prediction 1 30 - -
Bva13g03228 201 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 16 196 IPR044660 GO:0006355
Bva13g03228 201 CDD bHLH_AtIBH1_like 131 184 IPR044549 GO:0006355
Bva13g03228 201 MobiDBLite consensus disorder prediction 1 17 - -
Bva13g03228 201 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 173 IPR011598 GO:0046983
Bva13g03228 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 189 IPR036638 GO:0046983
Bva13g03228 201 PANTHER TRANSCRIPTION FACTOR BHLH149 16 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03228 Bva-Chr13 22467239 22468370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03228 18 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 47.753 3.45e-44 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03228 - - aprc:113873135 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03229 04 26211767 26212803 Bva13g03228 13 22467239 22468370 BWGD
Bva13g03228 13 22467239 22468370 Bva04g03229 04 26211767 26212803 ECH
Bva13g03228 13 22467239 22468370 Bva13g03228 13 22467239 22468370 ECH