Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03224 ATGTCTGGTGACCAAGATACAGACCGATATGGTGTGCTGCTCTACTACAAGTATAGTCAAATTTCTAACCTCAATGACATAGTCGATTTCTACGAGTCTAACTGTTCCTCTCTCGCCCTCCTTGGTCGTGTACGAATCTCTTCCCACGGCGTCAATGTCACGGTTGGTGGGAAGTTATCCTGTTTGGAGAGACACATTGAAGCGGTCAAGGCTAATAGCTTATTTGAAGGCACTGATTTCAAGCTTGCAACTTGTCATCGACCATTAAATGACAAGGTCGCAAAGGAATGTGGATTTACTTCTCTGTCAGTTCGGATTGTCAagGAACTGGTTACTCTTGGTTCTAATCCTATATTAAAGTTACCAGAAATTTCAAATGCTGGAAAACATCTCTCTGCAATCGAGTTCCATTCTGTCCTTCAGAATGCTGACAAAGAGAGCTCAGCAAACAACCTTGTTTTACTTGACGCAAGGAATCTATATGAGACAAGAATTGGGAAATTTCATGCACCAAATGTTGAAACTTTAGATCCAGAAATTAGGCAGTATAGTGATTTGCCGTCATGGTTCGAGGATAACGGTGAGcaattaaaagggaaaaatatccTGATGTACTGCACTGGCGGAATCAGGTGTGAAATGGCATCAGCATTTATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGGATACAACGGTATTTGGAGCAATTTCCAAATGGTGGTTTCTTCAAAggaaagaattttgtttttgatcaTAGGATATCTGTTGGGAGTTCAGATCCAAACATTGTTGGTACCTGCCTCCTTTGTGGCTGTTCCTTTGACAATTACTCTCCACGATGCCGATGTACTTATTGCAGAATGCTTGTCTTGGTCTGTAGCAGTTGCCAGCAAAAGGAAGCTGCGGTCTATGCTTGTGAACTATGCCAAAAGCAGGGCAAGGCTGTTGGATCATTGCAATCAATTGAATTTGGTGAGTTAAAATCATCGCCACCCGATAACGAATTCCAAAATGTTTCCTCGGATGCTGTATTTTCATCTCAAATGCCTTGTGGAGATGATGTCAGGTGTTCAAGAAAACTGAGAATCTTATGCTTACATGGATTCCGGCAGAATGCATCTAGCTTTAAAGGAAGAACGGCATCATTGGCcaaaaaactaaagaaaattactGAGTTTGTCTTTATAGATGCTCCTCACGAGTTGCCATTCATTTATCAGCCCCCAGCAAGGAGACCCCACGTGGATTGTGTAACAACTTCATTACCATCAAGTCCTCCTCCAACTATGGAAAAGTGCACAAGGAAGTTTGCTTGGTTTGTGGCACCCGGTTTTGATGGAACATGTGGCGGTGATTGGAAAGTTGCTGATGGTCCGTTTGATCCACTTCAATACCAAAACCAAACTGAAGGATATGATATTTCACTAACACACTTGAAGACTGTGTTTTCCCAAGAAGGGCCATTCGATGGAATCTTGGGATTTTCACAAGGTGCAGCGATGACTGCTTTCATCTCTGCACAGCAAGAGAAACTGCGAGGCGAGATAGACTTcagatttgtaattttgtgttCCGGCTTTGCTGCACGTGTAGAGGAGATGGACTGCGGATTGATCAAGTGCCCTTCTCTGCACATTTTTGGCAATGATCATGGTAGAGACAGGCAGATAGCCAACCAAGCTAGCAGGGAACTCGCTTCTATATATGATGCCGATTGCTCTGTGATCGTACGACATGATTCTGGCCACATAATTCCTACACGCTCTCCATATATTGATGACATCAAGGATTTCCTAAAGCGTTTCCTTAGGAAAGAAAGCGGGGCAATGTA 1850 0.4151 MSGDQDTDRYGVLLYYKYSQISNLNDIVDFYESNCSSLALLGRVRISSHGVNVTVGGKLSCLERHIEAVKANSLFEGTDFKLATCHRPLNDKVAKECGFTSLSVRIVKELVTLGSNPILKLPEISNAGKHLSAIEFHSVLQNADKESSANNLVLLDARNLYETRIGKFHAPNVETLDPEIRQYSDLPSWFEDNGEQLKGKNILMYCTGGIRCEMASAFIRSKGAGFENVFQLFGGIQRYLEQFPNGGFFKGKNFVFDHRISVGSSDPNIVGTCLLCGCSFDNYSPRCRCTYCRMLVLVCSSCQQKEAAVYACELCQKQGKAVGSLQSIEFGELKSSPPDNEFQNVSSDAVFSSQMPCGDDVRCSRKLRILCLHGFRQNASSFKGRTASLAKKLKKITEFVFIDAPHELPFIYQPPARRPHVDCVTTSLPSSPPPTMEKCTRKFAWFVAPGFDGTCGGDWKVADGPFDPLQYQNQTEGYDISLTHLKTVFSQEGPFDGILGFSQGAAMTAFISAQQEKLRGEIDFRFVILCSGFAARVEEMDCGLIKCPSLHIFGNDHGRDRQIANQASRELASIYDADCSVIVRHDSGHIIPTRSPYIDDIKDFLKRFLRKESGAM 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03224 616 SMART rhod_4 138 245 IPR001763 -
Bva13g03224 616 Pfam Rhodanase C-terminal 250 316 IPR022111 -
Bva13g03224 616 Gene3D alpha/beta hydrolase 363 613 IPR029058 -
Bva13g03224 616 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 4 608 - -
Bva13g03224 616 CDD RHOD_YceA 128 241 - -
Bva13g03224 616 Pfam UPF0176 acylphosphatase like domain 11 109 IPR040503 -
Bva13g03224 616 Gene3D - 118 271 IPR036873 -
Bva13g03224 616 SUPERFAMILY alpha/beta-Hydrolases 367 609 IPR029058 -
Bva13g03224 616 Pfam Serine hydrolase (FSH1) 364 600 IPR005645 -
Bva13g03224 616 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 122 262 IPR036873 -
Bva13g03224 616 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 4 608 IPR020936 -
Bva13g03224 616 Gene3D - 2 111 - -
Bva13g03224 616 ProSiteProfiles Rhodanese domain profile. 148 248 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03224 Bva-Chr13 22452280 22457093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03224 5 609 Sulfurtransferasese or Rhodanese AT1G09280 63.921 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03224 - - mtr:MTR_1g084180 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03224 13 22452280 22457093 Bva13g03224 13 22452280 22457093 ECH