Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03221 ATGTCGCCAAAACCCAGCCCAGACCTGCCCTTCAAACCCGGCAGTGCGGTGGAGATTAACCCCGCGGATGAAGGCTTTGGCGGCTCCTGGTATGAGGGCACTGTTATCCGCCGCTGCTCTTCCAAGAACAATGCCAGCCAATTCTTGGTGGAGTATAAAACCATCATGGAAACCCAGGATACTTCTAAGCCATTACAAGAAAAGGTGGATGCTGCGCTGCTTCGACCCGTGCCACCAAAAGATACTAACCGGGAATTCAAGTTTGGTGAAGTCGTCGATGCTTACTTCAATGAAGGGTGGTGGGAAGGCGCGATAACACAAGATTTGGGAAATGGGAGGTTTACGGTGTATTTCAGAGGCACAAAAGAGCAGATTGAATTTGGAAAAGAAGACCTGAGACTCCACCGTGAATGGGTTAATGGGAATTGGGTCCCGCCAATCGAAGAACAAAAGGCACCAGCAACAGAAGTGAAGTCTAATGAAGCATTCAGGTCGGGGACACTAGTTGAGGTCAGCAGTGATGAAGACGGTTTACAAGGAGCTTGGTTTGCTGCTACTATTGTTGAGGCAAGAGGAAACGATAAATTCCTCATTCAGTACCAAAGCCTGCGGACAGAAGATGATTCGGAGTTTTTGAAAGAGGAGATTGATGTCCTGCAAATAAGGCCTCGTCCACCAGAAACTCAGATCCCGGATCGTTTTAATGTCCTTGAAGAAGTTGATGCTTTGTACAATGATGGTTGGTGGGTCGGTGTGATCGCCGAAGTTCTAGAGGACTCAAGCTATATAGTTTACTTCAGGAACAACGACgaagaaatgaaatttcagCACTCTGAGTTGAGGCTGCATCAGGAATGGATCGATAACAAATGGATTATGGCTTCTGAGGCACTCAAGTTGTG 902 0.4678 MSPKPSPDLPFKPGSAVEINPADEGFGGSWYEGTVIRRCSSKNNASQFLVEYKTIMETQDTSKPLQEKVDAALLRPVPPKDTNREFKFGEVVDAYFNEGWWEGAITQDLGNGRFTVYFRGTKEQIEFGKEDLRLHREWVNGNWVPPIEEQKAPATEVKSNEAFRSGTLVEVSSDEDGLQGAWFAATIVEARGNDKFLIQYQSLRTEDDSEFLKEEIDVLQIRPRPPETQIPDRFNVLEEVDALYNDGWWVGVIAEVLEDSSYIVYFRNNDEEMKFQHSELRLHQEWIDNKWIMASEALKL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03221 300 Gene3D - 144 234 - -
Bva13g03221 300 Pfam Agenet domain 166 226 IPR008395 -
Bva13g03221 300 Pfam Agenet domain 90 147 IPR008395 -
Bva13g03221 300 Pfam Agenet domain 14 79 IPR008395 -
Bva13g03221 300 SMART agenet_At_2 9 82 IPR014002 -
Bva13g03221 300 SMART agenet_At_2 232 288 IPR014002 -
Bva13g03221 300 SMART agenet_At_2 84 140 IPR014002 -
Bva13g03221 300 SMART agenet_At_2 161 229 IPR014002 -
Bva13g03221 300 PANTHER AGENET-LIKE DOMAIN, AGENET DOMAIN, PLANT TYPE-RELATED 9 295 - -
Bva13g03221 300 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03221 Bva-Chr13 22438428 22442944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03221 173 286 PHD Transcription Factor Family AT5G58610 26.667 6.16e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03221 - - cpap:110815512 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03221 13 22438428 22442944 Bva13g03221 13 22438428 22442944 ECH