Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03213 atggaggttGGTGGCAATTCAGAGAAAACGATAGTGATCAATGACCTCAGATTTGCTTACCCTGGTATCGACGGCCATCCCCCGCCGGGTTCTTCTCCTCTCATCAAAGATTTTTGTCTCTCCCTCAATTCCGGCGATCGCTGCCTTCTCGTCGGATCTAATGGCGCCGGCAAGACTACCATCCTCAAGATTTTAGGAGGGAAGCACATGGTGGAACCAGACATGGTTCGTGTGCTAGGGAGATCAGCTTTTCATGACACCAGTTTAACATCTTCCGGTGATCTGAGCTATCTTGGTGGAGAGTGGAGGCGAGAAGTTGCTTTTGCAGGTTTTGAGGTTCCAATACAAATGGACGTTTCTGcagaaaaattgatatttgggGTAGGTGGGATAGATCCTGCAAGAAGAACTGAGCTAATCAAGGTTTTAGATATCGACCTTTCTTGGAGAATGCACAAGGTGTCTGATGGTCAAAGACGAAGAGTGCAAATTTGCATGGGACTCCTCAAGCCCTTCAAGGTTCTTCTCCTCGATGAGATAACAGTCGACCTTGATGTCCTAGCAAGGGCTGAccttcttaattttctaaaaaaggaATGTGAAGAGCGGGGTGCCACAATTATCTATGCAACGCATATATTTGATGGTCTTGAGAATTGGCCAACGCACATTGTTTATGTGGCTCATGGAAAGCTGCAACTAGCAATGCCGATGgacaaagtaaaagaaatgagCAAATTGTCACTTATGAGAACGGTTGAAAGTTGGTTGAGGAAAGAGAGGGatgaggagaagaagaggaggaaggAGAGGAAGTTGATGGGTCTTCCTGAATTTGATAAGCAAGTTGAGGGAAGCCGAGTGACAGGGGATCCAGCTCGTGCTGCTGTTCGAGCAATGAATAATGGCTGGGCCGCAGGTCGACTACATTCTACCGTTGCCGGCGAAGACAACTTTTTCCTAAGCTCAAATAGAGTATTGAGACAGTA 989 0.4287 MEVGGNSEKTIVINDLRFAYPGIDGHPPPGSSPLIKDFCLSLNSGDRCLLVGSNGAGKTTILKILGGKHMVEPDMVRVLGRSAFHDTSLTSSGDLSYLGGEWRREVAFAGFEVPIQMDVSAEKLIFGVGGIDPARRTELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLNFLKKECEERGATIIYATHIFDGLENWPTHIVYVAHGKLQLAMPMDKVKEMSKLSLMRTVESWLRKERDEEKKRRKERKLMGLPEFDKQVEGSRVTGDPARAAVRAMNNGWAAGRLHSTVAGEDNFFLSSNRVLRQ 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03213 329 SMART AAA_5 44 231 IPR003593 -
Bva13g03213 329 PANTHER ABC TRANSPORTER I FAMILY MEMBER 20 8 328 - -
Bva13g03213 329 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 8 328 - -
Bva13g03213 329 Gene3D - 8 276 IPR027417 -
Bva13g03213 329 Pfam ABC transporter 36 181 IPR003439 GO:0005524
Bva13g03213 329 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 254 IPR003439 GO:0005524
Bva13g03213 329 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 247 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03213 Bva-Chr13 22413530 22416071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03213 13 185 Calmodulin-binding Proteins AT2G36910 25.789 8.86e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03213 K12608 - vvi:100259555 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03213 13 22413530 22416071 Bva13g03213 13 22413530 22416071 ECH