Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03204 ATGGATGATAGCTGTGTTGTCTGTGCTGATACACTTGAGTGGGTTGCATATGGACCATGTAGCCATCGCGAGGTCTGCTCTACATGTGTAGTCCGCCTTCGTTTCATCTGCGGCGATTGTCATTGCTGCCTCTGCAAGTCTGAGTCCAACGTTGTTTTTGTGACTAAGGCTTTAGGAGATCATACAAAGTTAATAAATGACTTTTCAGTTTTTCCAGTCAATCCAACCGAGGGTCGAGTTGGATCATATTGGTATCATGAAGGAACACAAGcatattttgatgatttagATCACTACAAGATGATTAAGGACATGTGCAGGCTATCATGTGGTGTCTGTGATAAGATAAATGAacagaaaattgaaggaaCAAAAAGAACAGCCGAGTTCAAGAACATTGAGCAACTGAAAAGTCATCTACACCATCGGCATCGGCTATTCATGTGTAATCTGTGCTTGGAAGGTAGAAAGATATTTGTAAGTGAGCAAAAGGTATATACTAAGACGCAATTGGATCAACATATAAAGACGGGCAACTCGGTAATTGATGGCAATGAATGTGAAAGAGGTGGATTCATGGGACATCCTATGTGTGAATTTTGCCAGAACCCATTCTATGGAGATAATGAGCTGTACTCACATATGTCTACTGAGCATTATACCTGCCATATATGCCAAAGGCGGCACACTGGCCAGTACGAATATTACAAGGATTATGATGACTTGGAGAACCATTTTCGCGAAAAGCATTTTTTATGCGAGAATGAGGAGTGTCTAGCgaaaaaatttgttgtgttTGCAACTGAATCCGATTTTAAGAGGCACAATGCTGGAGAACACAAAGGATGCATATATCTTTCGAGGCACAATGTTGTTCATCAGaTACCGATTAGCTTGCGCTACCGTCAAAGCACCACGAACGATGGTCGAGGCAGTGAACATAATCATGATTCGTTGGGTAATCAACGTTTTTGGGCTAATCTTAGCATAGTCAATGAAGAAAACATCAATAATACTTCGTCGAGTGCACGAAGATTCAACAAAGTAAAGTCGACTGTTACTGAGTCCAGTGCTAATTCGTTTGACGTATTAGCTACTCTACAATCTGAGCCATCTTTAAGAAGCAATCTTGCGGCTGGACAAAACTACAGGAATAGGTTGCTGGAAGAATCTTCATTTCCTCCTTTACCTTCAGCTTCAAGAAGTAATCGACCTGAATCAAAAAGTCGTTTAGAAGAAATTGGGGAGACCACAACGGTGTCTCGCCACCATCATcgccaaaacaataaaaatgttacTAATTTTAGTTCTCGTGCTCAGCCAATCACAAGTATTCAGCCTATCTCATCAACTAGCAGTTCTCTCCAGCCAAGTTCGGTTGGCGATTCTCCCTGTTCTTCTCTGAGCAAGTCTGCAACCGTTACTGAATCTTCATTCCCTGTGAACAGAGGGTCGTTGAAAAACTCTATttctaaatctaaaatttctcCCATTTCTGTTAATGGTAGTGATGAGGTTCAGTCAAGTAGCCTGCCAGTGCTGAAGATGGAAGATGTTCAAACTGCCAACAAATTGCTGGTGGAAAAAATTCGTACTGCTTTGCATTTTGATGATAACAAGCTCGCTGCTTTTAGAGAAGCATCTGCTGGGTATCGACGAGGTTCTTTGAATGCTGAGGAATTTCTTGCGAAGGTGCATGAATTTGGCTTGTCACATCTCACTCTTGAGCTAGCTAGACTCTGTCCTGATGCCCAGAAACAAAAACAGCTCATTGAAACTTATAACCTTAATATGAGGATCAAGCCCAAGGACAATAATCTGGGCAGTGACAGTGGTCAGCCAAAAAAATCGAGTTCCAGAAAAGGTAAGGAAAAATGTGTGGACGAGGGAAGTCTTGCTCTAGCTGATAATTCCATCAGCTGTTTAAATAATGTGCAATACAAGTCTAAATCTTCTGAGAAAGAGTTGAAGAGTTTATCTTGTGCTAAAGGCAAATCGAAGGTTTCAGGGGATGATGATAGAATGGACAAGTCACCATGCAGCAGACAAGCGGGAACAGAGCAAATGAGCAAAATGGTTTCCCTGTCAGGTGGTGGCTGCTTAAAGAAAGATCAAGTGACGGAGGGAGCCGGAAATGGTAACAAGCAACGGAAGAAGATCCCCAAATTCCCAAGGAATCGCCTTGTAAATGATGTTACTGCTATCTCAGACCTTGATGATTCTGATCCTGGACCTACTCATTGTCTAGAACAAACACCAGATAGAAATCAGGACCCTCCGCGACCCGTGCCACTACTTGGAGTTTGGCAGAACGGAGGGGGCAAGAGAATAGTGGCAAAGACGCAGATTAAACTCATAAAATA 2363 0.4101 MDDSCVVCADTLEWVAYGPCSHREVCSTCVVRLRFICGDCHCCLCKSESNVVFVTKALGDHTKLINDFSVFPVNPTEGRVGSYWYHEGTQAYFDDLDHYKMIKDMCRLSCGVCDKINEQKIEGTKRTAEFKNIEQLKSHLHHRHRLFMCNLCLEGRKIFVSEQKVYTKTQLDQHIKTGNSVIDGNECERGGFMGHPMCEFCQNPFYGDNELYSHMSTEHYTCHICQRRHTGQYEYYKDYDDLENHFREKHFLCENEECLAKKFVVFATESDFKRHNAGEHKGCIYLSRHNVVHQIPISLRYRQSTTNDGRGSEHNHDSLGNQRFWANLSIVNEENINNTSSSARRFNKVKSTVTESSANSFDVLATLQSEPSLRSNLAAGQNYRNRLLEESSFPPLPSASRSNRPESKSRLEEIGETTTVSRHHHRQNNKNVTNFSSRAQPITSIQPISSTSSSLQPSSVGDSPCSSLSKSATVTESSFPVNRGSLKNSISKSKISPISVNGSDEVQSSSLPVLKMEDVQTANKLLVEKIRTALHFDDNKLAAFREASAGYRRGSLNAEEFLAKVHEFGLSHLTLELARLCPDAQKQKQLIETYNLNMRIKPKDNNLGSDSGQPKKSSSRKGKEKCVDEGSLALADNSISCLNNVQYKSKSSEKELKSLSCAKGKSKVSGDDDRMDKSPCSRQAGTEQMSKMVSLSGGGCLKKDQVTEGAGNGNKQRKKIPKFPRNRLVNDVTAISDLDDSDPGPTHCLEQTPDRNQDPPRPVPLLGVWQNGGGKRIVAKTQIKLIK 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03204 787 MobiDBLite consensus disorder prediction 405 423 - -
Bva13g03204 787 SMART c2h2final6 108 144 IPR013087 -
Bva13g03204 787 SMART c2h2final6 196 219 IPR013087 -
Bva13g03204 787 SMART c2h2final6 220 250 IPR013087 -
Bva13g03204 787 SMART c2h2final6 251 280 IPR013087 -
Bva13g03204 787 MobiDBLite consensus disorder prediction 704 723 - -
Bva13g03204 787 ProSitePatterns Zinc finger C2H2 type domain signature. 198 219 IPR013087 -
Bva13g03204 787 CDD RING-HC_ZNF598 5 46 IPR041888 -
Bva13g03204 787 MobiDBLite consensus disorder prediction 656 680 - -
Bva13g03204 787 MobiDBLite consensus disorder prediction 430 486 - -
Bva13g03204 787 PANTHER ZINC FINGER PROTEIN 598 1 483 IPR044288 GO:0061630|GO:0072344
Bva13g03204 787 MobiDBLite consensus disorder prediction 735 763 - -
Bva13g03204 787 MobiDBLite consensus disorder prediction 601 615 - -
Bva13g03204 787 PANTHER ZINC FINGER PROTEIN 598 468 784 IPR044288 GO:0061630|GO:0072344
Bva13g03204 787 MobiDBLite consensus disorder prediction 390 486 - -
Bva13g03204 787 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 468 784 - -
Bva13g03204 787 MobiDBLite consensus disorder prediction 601 624 - -
Bva13g03204 787 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 1 483 - -
Bva13g03204 787 MobiDBLite consensus disorder prediction 656 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03204 Bva-Chr13 22373670 22378198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03204 1 774 C2H2 Transcription Factor Family AT3G62240 41.686 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03204 K22381 - qsu:112024618 791.956