Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03197 ATGGGCGGAGGTGGAGCGGAGGCACAGTACGTCTCTGCTAAGACGTCCGTTTGGTGGGACATTGAGAACTGCCATGTCCCCAAAGGCTGCGATCCGCACGCCATCGCCCAGAATATAAGCTCCGCTCTCGTCAGGGTAAACTATTGTGGGCCAGTCTCCATCTCCGCCTACGGTGATACTACCGGTATCCCGGCCTCTGTACAGCAAGCCCTCTCTAGTACTGGAATCTCCCTCAACCACGTCCCTGCTGGTGTTAAGGACGCTAGCGACAAGAAGATTCTCGTGGACATGTTGTTCTGGGCTGTGGACAATCCTGCTCCtgctaattatttattaatttctggTGATCGAGACTTCTCTAATGCTCTTCATCAATTGCGGCTGAGGAGATATAATATTCTTCTTGCACGACCTCAGAATGCTGCTTCACCACTTGTTGCAGCTGCTAAAAGTGTATGGCTTTGGACTAGTCTCTTAGCCGGTGGCCCTCCTCTACCTAATGGCGAGTCACAACAACTTGGTAACAATAGCTTCCTATCAAGTTCTGATACCATACAAATTCCAGTCTCTAATGAAGCTCATATAGGAAATCAGAAATTTCCAAATGCGGGAAGGTCATTTGATGCTAGATATCAGGGGAAAACAAACCGGAAAAAGTCAAGTCAACCAAATGGAACCAAAGCTTCGAATCTGCCAACTGGACTTCAAGAAAATCATAGCAATATTAACTCGTATCGTCCTGGCAACTATAGCCCAAGTGTTTCCCTTAGTGGGTCTGCTCCAAATTTTGCTCAAGGAAATCACGATCAGATGTGGAGCAATAACAGTAATTATCAAATTCCTTATTCACAGCCACTAAGACCTAATAGTTCTCCTCCTCCATTGCAACCTGCTTTTGCACCGAGTATTTCATATCCACCTAATTCCCATACTTTTGCAACTTCAGTCGTACCTCCTAGGACTGGTGGACCCAGTTTCTCCTCAGGACCACATACAAAAGTGCCAGATATTAGAAATCTAAATATTTCTGGGTATCCTAACAATGTTCATGATCCTCGTATTGTTCAGCAACGCAGTGGAGACTTAAAACAGAATCCTAATAATAATGCTCCACATCCAAGACCATttgaagaacaaaatggacataTGGTGCATAGCACACAACCATCATACCCTGGTTACCCTCATGGTACAGAATATCCATCTACATCTATGGCGGCATTGGGCAATAATAACCATCCTGGTAATGGTACATGGGGATCTGCAGGATGCCCTAAACCTTCTGAATATGTCCAAGGTGTTATAGGGGTCGTCTTACTTGCTTTGAACACactaaagaatgaaaagataatGCCAACTGAAGCAAATATAACCGATTGCATCCGTTATGGAGATCCCAAACACCGTCAAACAGATGTTAAGAAGGCTCTGGAGAGTGCTATTGAACAGCAGATGGTGGTGAAAAAGAATTTAGGTAACTTGCAGTTTTATGTTGGAAAGAATGATAATAAACTTTGGAAGTGTGTAAATCCTATTGGCGGTAATCCTAAGCAGTACACAAAAGAAACATGggatgaaattcaaaattttttaacatcttcTCCTGGAAGGTCGGCAATGATGGCTACTCAATGCAAGTATGAAGCAGGTactatattgaaaaatatgtgCTTGAAAGATTTCAGTTTGGGTGATGTACTTCGGATTTTGAACATGGTTGTTGCCCATAAAAAATGGATTGTGCATCAACAGACGGGATGGCAACCACTTAACATTACTCTTCCTGAGACAAACACTGATTCATGGTTAACTGCAGCCGTAGGTGGTTGCGGTAATGGAAAGCCTCCTGGAGAAATCTA 1859 0.419 MGGGGAEAQYVSAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRVNYCGPVSISAYGDTTGIPASVQQALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRLRRYNILLARPQNAASPLVAAAKSVWLWTSLLAGGPPLPNGESQQLGNNSFLSSSDTIQIPVSNEAHIGNQKFPNAGRSFDARYQGKTNRKKSSQPNGTKASNLPTGLQENHSNINSYRPGNYSPSVSLSGSAPNFAQGNHDQMWSNNSNYQIPYSQPLRPNSSPPPLQPAFAPSISYPPNSHTFATSVVPPRTGGPSFSSGPHTKVPDIRNLNISGYPNNVHDPRIVQQRSGDLKQNPNNNAPHPRPFEEQNGHMVHSTQPSYPGYPHGTEYPSTSMAALGNNNHPGNGTWGSAGCPKPSEYVQGVIGVVLLALNTLKNEKIMPTEANITDCIRYGDPKHRQTDVKKALESAIEQQMVVKKNLGNLQFYVGKNDNKLWKCVNPIGGNPKQYTKETWDEIQNFLTSSPGRSAMMATQCKYEAGTILKNMCLKDFSLGDVLRILNMVVAHKKWIVHQQTGWQPLNITLPETNTDSWLTAAVGGCGNGKPPGEI 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03197 619 CDD PIN_limkain_b1_N_like 14 138 - -
Bva13g03197 619 PANTHER LIMKAIN B LKAP 2 592 IPR024768 GO:0005777|GO:0010468|GO:1903231
Bva13g03197 619 Gene3D - 8 157 - -
Bva13g03197 619 Pfam OST-HTH Associated domain 543 597 IPR025677 -
Bva13g03197 619 MobiDBLite consensus disorder prediction 212 301 - -
Bva13g03197 619 Pfam NYN domain 14 150 IPR021139 GO:0004540
Bva13g03197 619 MobiDBLite consensus disorder prediction 216 285 - -
Bva13g03197 619 MobiDBLite consensus disorder prediction 286 301 - -
Bva13g03197 619 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03197 Bva-Chr13 22334583 22337383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03197 6 248 C2H2 Transcription Factor Family AT5G61190 60.246 5.20e-86 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03197 - - gmx:100794608 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03197 13 22334583 22337383 Bva04g03204 04 26096060 26099693 ECH
Bva13g03197 13 22334583 22337383 Bva13g03197 13 22334583 22337383 ECH