Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03192 ATGGATGCgaagaaaataattgcaaTATGCCAGTTTGGAGGTGAATTTGAAACTGAGAAAGATGGTTCTTTGTCATATAGAGGTGGTGATGCACATGCTGTCGACATTGATGATCAAATGAAGTTTAACGAGTTCAAGGTGGAAGTGGCAgaagtatttaattttagtgttGATAGCATGTCTATCAAGTATTTGCTTCCTGGAAACAAGAAGACTCTCATTACAATTTCCAATGACAAGGATCTAAAACGGATGGTTAAATTTCATGGGGGTTCAAGTACTGttgatatttatatctttattgaGGATGTAGCTGCCCCTGACGTGTCAAATATGCCTGCCAGTAGGTCAAGCAGAACAACCTTGTCTGAAACTGTGGTTCCAGTCAATGCCCCTCTCGATGTTGTGGATGATCTAATCGATGACACCACCCATTCGATAATTCCACTTGATGTTGCTGAAGATACAAATCAAGTTGATACAAATATGAATGTTCCCACAGAAGCTTCCCCCATTTTTGTTGTCTCAAATGACGAGAAGTATGCTAAAGGGGCGCAGCAATGGCAGAACACTATCACGGGTGTAGGACAAAGGTTCAGCAGTGTCCATGAATTTCGGGAGTCGTTGCGTAAATATGCCATTGCTCATCAGTTTGCCTTTAagtataagaaaaatgatagtCATCGCGTGACTGTTAAATGCAAAGCAGAAAGTTGTCCATGGAGAATTCATGCATCAAGGTTGTCTACTACTCAATTGATATGTATCAAGAAAATGAATCCAACTCATACTTGCGAAGGAGCTGTTGCAACAACAGGGCATCAAGCAACTAGGAGTTGGGTGGCCAGTATTATTAAGgagaaattgaaagttttcCCAAATTATAAGCCCAAGGATATTGTCAACGACATCAAACAGGAATATGGAATACAACTTAACTACTTCCAGGCATGGCGTGGGAAAGAGATAGCAAAAGAGCAGCTGCAGGGCTCCTATAAAGAAGCATATAGTCAGTTACCTTTCTTTTGCGAAAAGATACTGGAGGCTAACCCTGGAAGTTTGGCTACTTACACCACAAAAGAAGACTCAAGCTTCCATCGCCTCTTTGTATCTTTTCACGCTTCATTGTATGGCTTTCAACAAGGTTGCCGGCCATTGATTTTCCTTGATAGCATTCCACTGAAGTCAAAATACCAAGGTACATTGTTAGCAGCCACAGCTGCTGATGGGGATGATGGTGTGTTTCCTGTTTCTTTTGCTGTTGTAGATGCTGAATCTGATGATAATTGGCACTGGTTCTTACTTCAACTGAAATCCGTGCTGTCAACATCTTGTCCCATAACATTTGTGGCAGACAGAGAGAAGGGACTAAAAAAGTCTATTGCTGAGATATTTGCAGGTTCATTTCATGGTTATTGCCTTCGATACTTGACTGAGCAACTTATTAGAGACTTGAAAGGACAGTTTTCTCATGAGGTAAAGCGACTGATGATCGAGGATATATATGCTGCCGCTTATGCACCCAAGCCAGAAGGCTTTCAAAGCTCTATAGAGAACATTAAGAGCATATCAATAGATGCTTACAATTGGATCATACGAAGTGAACCCCAAAACTGGGCGAATTCATATTTCCAGGGTGCCAGATATAATCACATGACATCGAACTTTGGGGAGCTGTTCTATAGTTGGGCATCAGATGCAGATGAACTGCCAATAACACAAATGGTTGATGTGATAAGTGGTAAGATTATGGAATTGATTGTTACTAGAAAGGCAGAGTCTGACCAGTGGTTGACTAGGCTAACTCCATCCATGGAGGAATaccttgaaaaagaaagtcatAAGGCTCATACACTTCAAATTGTATTGTCCACCGGTAGCACATACGAGGTTTGTGGAGACTCTATTGAGTTGGTTGATATCGATCATTGGGACTGTAGTTGCAAAGGCTGGCAGCTGACTGGTTTACCATGCTGCCATGCCTTTGCTGTCATTATGGGCATTGGTCGGAGTCCTTATGATTATTGCTCCAGATTCTTTACTACCGAGAGTTACAGATTGACTTATTCAGAGTCTGTCCGTCCAATTCCACATGTAGATACGCCTGCTGTAAAAGATTCTCAGCTTGCAGTAACTGTAACCCCTCCTCCTACCCGACGACCACCTGGCCGACCTACAACAAAGCGATATGGGTCACATTCACAAGACATAGTGAAGCGCCAACTGCAGTGCAGCAGATGCAAAGGGCTGGGGCACAACAAGTCAACCTGCAAGGATTTACTTTA 2285 0.4083 MDAKKIIAICQFGGEFETEKDGSLSYRGGDAHAVDIDDQMKFNEFKVEVAEVFNFSVDSMSIKYLLPGNKKTLITISNDKDLKRMVKFHGGSSTVDIYIFIEDVAAPDVSNMPASRSSRTTLSETVVPVNAPLDVVDDLIDDTTHSIIPLDVAEDTNQVDTNMNVPTEASPIFVVSNDEKYAKGAQQWQNTITGVGQRFSSVHEFRESLRKYAIAHQFAFKYKKNDSHRVTVKCKAESCPWRIHASRLSTTQLICIKKMNPTHTCEGAVATTGHQATRSWVASIIKEKLKVFPNYKPKDIVNDIKQEYGIQLNYFQAWRGKEIAKEQLQGSYKEAYSQLPFFCEKILEANPGSLATYTTKEDSSFHRLFVSFHASLYGFQQGCRPLIFLDSIPLKSKYQGTLLAATAADGDDGVFPVSFAVVDAESDDNWHWFLLQLKSVLSTSCPITFVADREKGLKKSIAEIFAGSFHGYCLRYLTEQLIRDLKGQFSHEVKRLMIEDIYAAAYAPKPEGFQSSIENIKSISIDAYNWIIRSEPQNWANSYFQGARYNHMTSNFGELFYSWASDADELPITQMVDVISGKIMELIVTRKAESDQWLTRLTPSMEEYLEKESHKAHTLQIVLSTGSTYEVCGDSIELVDIDHWDCSCKGWQLTGLPCCHAFAVIMGIGRSPYDYCSRFFTTESYRLTYSESVRPIPHVDTPAVKDSQLAVTVTPPPTRRPPGRPTTKRYGSHSQDIVKRQLQCSRCKGLGHNKSTCKDLL 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03192 761 MobiDBLite consensus disorder prediction 714 734 - -
Bva13g03192 761 Pfam MULE transposase domain 387 477 IPR018289 -
Bva13g03192 761 PANTHER F10A16.15 PROTEIN 52 757 - -
Bva13g03192 761 SMART PB1_new 19 104 IPR000270 GO:0005515
Bva13g03192 761 CDD PB1_UP2 9 100 - -
Bva13g03192 761 ProSiteProfiles Zinc finger SWIM-type profile. 637 669 IPR007527 GO:0008270
Bva13g03192 761 Gene3D - 25 101 - -
Bva13g03192 761 Pfam MuDR family transposase 191 256 IPR004332 -
Bva13g03192 761 SMART 26again6 644 671 IPR006564 GO:0008270
Bva13g03192 761 Pfam PB1 domain 21 97 IPR000270 GO:0005515
Bva13g03192 761 SUPERFAMILY CAD & PB1 domains 21 94 - -
Bva13g03192 761 Pfam SWIM zinc finger 639 665 IPR007527 GO:0008270
Bva13g03192 761 PANTHER POLYPROTEIN, PUTATIVE-RELATED 52 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03192 Bva-Chr13 22317535 22321477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03192 5 100 MAP Kinase Kinase Kinase AT1G16270 28.846 8.70e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03192 13 22317535 22321477 Bva13g03192 13 22317535 22321477 ECH