Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03189 ATGGACTCTCGATGGAACAGTGGTAGGCAGGAAACAAGTTTCCGTGACAGGAGGCAAACTGGGAAGGAGCAGGCATATCAGGACTCCCTTATTGAGGATTTGGCAGAGGATTTTCGCTTGCCGATCAACCACAGGCCAACTGAAAATGTTGATTTAGACAATGTGGAACAAGCATCTCTGGATACACAGTTAACATCATCTAATATTGGATTTAAGCTTCTCCAAAAGATGGGGTGGAAAGGAAAAGGTCTTGGGAAGGATGAGCAAGGCATCACTGAGCCAATAAAATCTGGGATTAGAGACCCAAAATTGGGGATTGgtaaacaagaagaagatgatttttttacaGCAGAAGAAAATATCCAGAGAAAAAAACTTGATGTTGAATTAGAGGAGACAGAGGAACATGTGAAGAAGCGGGAGAAGGCAGCATATAGCATATATGCTTGTCTTTTAACGGGATTGGTCTTAGCAGAACGTGAGCAGAAAATTCAGACTGAGGTGAAAGAAATCCGAAAGGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAGTTGGCAATGGAATTTGAAGCGCACCTGAGTTCATATGATCACAATCACAGAAAgCGTTTCAAACAAATGAAGGAAATGCATGGTGGTAGTAGCAGGGATGACCGGCAAAAACGAGAACAACAGCGTCAAGAGAGGGAAATGGCCAAGTTTGCTCAAATTGCTGACGCTCGAAAGCAGCAACAAATGCAACAGCAACAAAATGATTCTACACCTGCTCCGGCTTCATCTGAATCTAGAACTGCTACTGCACTTGCAGATCAGGAGCAGCGgaaaactttgaagtttgGTTTTTCCTCTAAAGGCAGTGGTTCCAAGAATTTATTTGGTGGTGCTGCAAAGAAGCCTAAAGTTGCAGCTTCCTCGATATTTGGCAACGATACTGATGAGGAATA 947 0.4129 MDSRWNSGRQETSFRDRRQTGKEQAYQDSLIEDLAEDFRLPINHRPTENVDLDNVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKDEQGITEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRKKLDVELEETEEHVKKREVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGGSSRDDRQKREQQRQEREMAKFAQIADARKQQQMQQQQNDSTPAPASSESRTATALADQEQRKTLKFGFSSKGSGSKNLFGGAAKKPKVAASSIFGNDTDEE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03189 301 ProSiteProfiles G-patch domain profile. 66 111 IPR000467 GO:0003676
Bva13g03189 301 SMART G-patch_5 64 109 IPR000467 GO:0003676
Bva13g03189 301 MobiDBLite consensus disorder prediction 194 223 - -
Bva13g03189 301 MobiDBLite consensus disorder prediction 227 276 - -
Bva13g03189 301 Pfam Zinc-finger double-stranded RNA-binding 161 188 IPR022755 -
Bva13g03189 301 ProSitePatterns Zinc finger C2H2 type domain signature. 163 185 IPR013087 -
Bva13g03189 301 MobiDBLite consensus disorder prediction 9 23 - -
Bva13g03189 301 MobiDBLite consensus disorder prediction 1 26 - -
Bva13g03189 301 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 301 - -
Bva13g03189 301 Pfam G-patch domain 67 107 IPR000467 GO:0003676
Bva13g03189 301 MobiDBLite consensus disorder prediction 194 301 - -
Bva13g03189 301 SUPERFAMILY beta-beta-alpha zinc fingers 144 196 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03189 Bva-Chr13 22308930 22312261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03189 1 301 C2H2 Transcription Factor Family AT5G26610 68.197 1.57e-132 376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03189 13 22308930 22312261 Bva13g03189 13 22308930 22312261 ECH