Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03184 ATGGGAAGACACTCTTGCTGTTACAAGCAGAAGCTAAGAAAGGGCCTCTGGTCTCCAGAGGAAGATGAGAAGCTTCTGAATTATATCACTAAACATGGCCATGGATGTTGGAGCTCTGTCCCCAAACTTACTGGCTTGCAGAGGTGTGGCAAGAGCTGCAGGTTGAGGTGGATAAATTACCTTAGGCCTGATTTGAAGAGAGGAGCATTCTCACAGCAGGAAGAGAATTTGATAATTGAACTCCATGCAGTCCTTGGCAACAGATGGTCTCAGATTGCAGCTCAATTACCAGGAAGAACTgacaatgagataaaaaatctATGGAATTCCTGCCTCAAGAAGAAGCTTAGGCAAAGAGGCATTGACCCAAACACCCACAAGCCTCTCTCTGAAGTTGAGAACGACAAGGACAAGCCACCTACAGCCGACAAAAACAACCAGAAAGGCTCAGTGGGATCCAATGAGCTGAGTCTTGCAGCTGAGCCACCAAAACTAAAGCCTAGTTCATTATCGATGCCTGCAGACCCATATCCACTCGAAGTTTCCTCCAGTTCAAGGATCAATAATAGCAGCAGTAGCAGCAGCAATTTGACAAGCACCACTCCCACCCAGGATTTGTTTTTAGATAGGTTCGGTACTTGTCATGATAACTCCATCACCAATTGCAGACCTTCTGATATGGTGGGCTATTTCCCTTTTCAGCAGTTGAACTATGGAGCAAATATTGGCCTCTCTGCAAATCCCAATTCTTCTCTTTGCTTTATACCAAGTTCCAGTTCTTCTCAGGTGATGTCAGAGCTCACTCCTCCTGTGCTGCCGTCTGTGACAAGTTCAATATTCTCTACTCCAACATATACTGTAAAGCCAACCGTTAGTCTTCAGTCTAATAATCCTTCTATATCTTCGGGTCATGACATTGATGGGGTTCATAATTGGGAAGCCAGTACCTTCAGCAACAACGGAAGCAAAAGCAATGGAAGCAATAACAGTATCCAATTACAAAACAGCATTAACTTCCTAGACAGCAACACTTTAACATGGGGTCTGGCGGAGTCTGTGAAGGCTGATCATAAAGATAATCATGTATTACAAGGACAAGGAGAACAAGAAGAGATTAAATGGTCTGAATATCTTAACACTCCCTTCCTCCTTGGAAACCCAGTGCAGAATCAAGCCTCTCAATCTATCTACAATGAGGTAAAACCAGAAACAGGCTTCATCACAGATGAGTCAAGTACTACCTGGCACCATAGCCAGGCTTTCCAAGCTTCAGATATATATACCAAGGATCTTCAAAGATTTTCAGTGGCTTTTGGACAAACCCTTTA 1328 0.433 MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLTGLQRCGKSCRLRWINYLRPDLKRGAFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHKPLSEVENDKDKPPTADKNNQKGSVGSNELSLAAEPPKLKPSSLSMPADPYPLEVSSSSRINNSSSSSSNLTSTTPTQDLFLDRFGTCHDNSITNCRPSDMVGYFPFQQLNYGANIGLSANPNSSLCFIPSSSSSQVMSELTPPVLPSVTSSIFSTPTYTVKPTVSLQSNNPSISSGHDIDGVHNWEASTFSNNGSKSNGSNNSIQLQNSINFLDSNTLTWGLAESVKADHKDNHVLQGQGEQEEIKWSEYLNTPFLLGNPVQNQASQSIYNEVKPETGFITDESSTTWHHSQAFQASDIYTKDLQRFSVAFGQTL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03184 442 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva13g03184 442 MobiDBLite consensus disorder prediction 181 202 - -
Bva13g03184 442 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva13g03184 442 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva13g03184 442 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bva13g03184 442 CDD SANT 17 61 IPR001005 -
Bva13g03184 442 Gene3D - 68 146 - -
Bva13g03184 442 Gene3D - 11 67 - -
Bva13g03184 442 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bva13g03184 442 SMART sant 13 63 IPR001005 -
Bva13g03184 442 SMART sant 66 114 IPR001005 -
Bva13g03184 442 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bva13g03184 442 PANTHER HOMEODOMAIN-RELATED 1 435 - -
Bva13g03184 442 MobiDBLite consensus disorder prediction 119 202 - -
Bva13g03184 442 PANTHER MYB DOMAIN PROTEIN 55 1 435 - -
Bva13g03184 442 MobiDBLite consensus disorder prediction 119 143 - -
Bva13g03184 442 CDD SANT 69 109 IPR001005 -
Bva13g03184 442 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03184 Bva-Chr13 22269576 22271618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03184 1 442 MYB Transcription Factor Family AT1G09540 47.903 4.16e-124 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva13g03184 Myb_DNA-binding 6.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03184 K09422 - qsu:112017656 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03196 04 26047592 26049747 Bva13g03184 13 22269576 22271618 BWGD
Bva13g03184 13 22269576 22271618 Bva04g03196 04 26047592 26049747 ECH
Bva13g03184 13 22269576 22271618 Bva13g03184 13 22269576 22271618 ECH