Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03159 ATGGGTAACGGCACTTCTCGTGTTGTTGGCTGTTTAGTGCCATTTAATGGCAAAAGTGGGGTTGATTTGGAGTTTCTTGAGCCACTAGACGAAGGATTAGGCCATTCTTTCTGTTATGTGAGGCCATCAATTTTCGAATCTCCTGCCATTACCCCATCTAACTCCGAGAGGTTCACAGTTGGTTCGAGTACCCTTGATTCTGAAACTTTAAGTGGATCGTTTAGGCATGATAGCATAGAAGATAACCCAGGAATACACAAGCTAGGCAAGAACTTCCCAGAAACCACATTCAAAACAATTTCAGGGGCTTCAGTTAGTGCTAATGTTTCTACAGCAAGGACAGGTAACCAGAATGCATTATTTGTTAGCGATGCTCTAGAACCTGCTGCATCATTTGAGGGAACCTCCTCATTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGTGGTTCTGGACCTCTGAATGGTTTCATGTCTGGACCTCTTGAGAGAGTTTATGCTTCAGGTCCATTGGATAGGGGAGGTGATTTTATGTCTGGGCCAATAGAGAAGGGAGTTATGTCCGGTCCTCTTGATGCCACAGACAAATCCAACTTCTCTGCACCGCTTGCTCGTGGTCGTAGAAGGCAACGCCTCCATCATCTTATGAGAAGCGTGAGTGGTCCGATGAGAAGCACTTTTTCTAGGACCTTCTCTAAGAATTCTTTGGGTGGCAGTTGGATGCAGCGGTTGTTCTTTCACCCGTTTACTCAATTGGCTTGGCATTCTAAAGATGCGAAGTTTCGAACTGAAGCCTCTAGAAACTGCATTGAAGTTGGGCCAGTTGAAGGGGAGTATAATCACAAGCACAATGTGCAGTGGGCTCATGGCAAGGCTGGCGAAGATAGGGTTCAATTGGTGCTTTCTGAAGAACAAGGATGGTTGTTTATTGGGATATACGATGGTTTTAGTGGACCAGATGCACCTGATTTTGTGATGAGCCATCTTTATAGATTTATTGATAAGGAACTGGAAGGGTTGCTTTGGGTTTATGAAAATCCTACAGATCCTGTTAAACCTGAATTACCTGGAACTGGAAATGCTGATATCGCTCCAGCACACAGCAGGGAGGACCTGTCAAATACTAATACCAATTCGAACCAAGAAAGCGCTTGCTGTTTAACTGCTGCTTCAGTAGTTGTGAGGGATCAATCATCTAACAGCGTGAGAGTTGAGGATAATGTTGAACAACAATTAACATATCGTGGAAGTCCCAGTTTATCAGGTTCTGTTCCTGCTTCTGTTTCGCTTGGACACGTGGCTGGTCAAGGTAGAAAAAGTGTGCGGCTTTATGAGCTGCTTCAGTTGGAATCTTGGCATGAACATGGTTTCTCGTCAATCTCAGAACAAACTAAGATTTCACCGGTTTCTAGGAAATCATCACAAGAGAGGCAGATGAGATCTTGCTCATCTGATGCAAAAGAACAAGATTCTTGCCAACAGGATGAATGTCCCACTACTTCAGGAGAAAATGGAGGCATTGGGTttgaatcaattaataatGGGTCCGGAACTGCTGTTTCTGTTTcagcagaaaaaaagaatacaagaaaGTCGTTCATTGGtacaaaaatcagaaaaatgtACAGGAAGCAGAAGTCCTTGCGTAAGAAACTTTTCCCATGGAGTTATGATTGGCATAGGGGGGAAACTTGTGTTGAAGAGAAAATAGTGGAAGCATCAGGACCTATTAGAAAATGTAAATCTGGGGTAGTTGATCACGATGCCGTTTTAAGAGCAATGGCCCGGGCTCTAGAAAGAACCGAAGAGGCATACATGGAAATGGTGGAGAATAATCTGGACAACAATCCAGAGCTTGCTTTAATGGGATCATGTGTTTTAGTGATGCTAATGAAGGATCAAGATGTTTATGTCATGAACCTCGGAGATAGCCGTGTAATCTTGGCTCAAGAAAAACCAAACGATCATCATCCTAATCCATGTTTTGCCAAGGATGACGTGGGGCATAGAAATCGATCTAGAGAGTCGTTAGTGCGCATGGAGCTGGATAGAATTTCAGAGGAGTCCCCAATTCACAATCAAAACAGTCATCTTAACAAGATGAACAAAGATAGGGAGATATCCATTTGCAGATTAAAAATGAAGGCTGTTCTGCTTTCCACAGATCACAGCACAAGTGTCGAAGAGGAAGTTTTTAGAATAAGGGCAGAACATCCTGATGATAATGAAGCTGTCTTAAATGACCGAGTAAAAGGACAATTGAAAGTCACCAGAGCGTTTGGCGCTGGATTCCTGAAGAGGACATCCTTCAATGAAGCTCTACTGAGGATGTTTCGGGTTGATTACGTGGGCTCTGCACCTTACCTAAGTTGCACTCCTTCTGTTCTTCATCACCGACTCTCCTCAAGTGATCGGTTCTTAGTGCTGTCCTCTGATGGGCTTTATCAGTATTTCAGCAACGAAGAGGTAGTTGCCCATGTCACTTGGTTCATGGAAAATGTCCCTGAAGGTGATCCTGCACAATACCTCATTGCTGAGCTTCTCTTCCGTGCTGCCAAAAAGAACgGAATGGATTTTCACGAATTGCTTGATATTCCCCATGGAGATCGACGTAAATATCATGATGACGTCTCTGTTATGGTGGTTTCACTGGAGGGAAGGATTTGGAGATCATCaggata 2678 0.4309 MGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVGSSTLDSETLSGSFRHDSIEDNPGIHKLGKNFPETTFKTISGASVSANVSTARTGNQNALFVSDALEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERVYASGPLDRGGDFMSGPIEKGVMSGPLDATDKSNFSAPLARGRRRQRLHHLMRSVSGPMRSTFSRTFSKNSLGGSWMQRLFFHPFTQLAWHSKDAKFRTEASRNCIEVGPVEGEYNHKHNVQWAHGKAGEDRVQLVLSEEQGWLFIGIYDGFSGPDAPDFVMSHLYRFIDKELEGLLWVYENPTDPVKPELPGTGNADIAPAHSREDLSNTNTNSNQESACCLTAASVVVRDQSSNSVRVEDNVEQQLTYRGSPSLSGSVPASVSLGHVAGQGRKSVRLYELLQLESWHEHGFSSISEQTKISPVSRKSSQERQMRSCSSDAKEQDSCQQDECPTTSGENGGIGFESINNGSGTAVSVSAEKKNTRKSFIGTKIRKMYRKQKSLRKKLFPWSYDWHRGETCVEEKIVEASGPIRKCKSGVVDHDAVLRAMARALERTEEAYMEMVENNLDNNPELALMGSCVLVMLMKDQDVYVMNLGDSRVILAQEKPNDHHPNPCFAKDDVGHRNRSRESLVRMELDRISEESPIHNQNSHLNKMNKDREISICRLKMKAVLLSTDHSTSVEEEVFRIRAEHPDDNEAVLNDRVKGQLKVTRAFGAGFLKRTSFNEALLRMFRVDYVGSAPYLSCTPSVLHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03159 892 PANTHER PROTEIN PHOSPHATASE 2C 11 892 IPR015655 GO:0004722|GO:0006470
Bva13g03159 892 SUPERFAMILY PP2C-like 290 884 IPR036457 -
Bva13g03159 892 MobiDBLite consensus disorder prediction 350 379 - -
Bva13g03159 892 SMART PP2C_4 277 881 IPR001932 -
Bva13g03159 892 CDD PP2Cc 585 883 IPR001932 -
Bva13g03159 892 Gene3D - 448 889 IPR036457 -
Bva13g03159 892 Pfam Protein phosphatase 2C 705 854 IPR001932 -
Bva13g03159 892 Pfam Protein phosphatase 2C 605 653 IPR001932 -
Bva13g03159 892 PANTHER PROTEIN PHOSPHATASE 2C 32 11 892 - -
Bva13g03159 892 Coils Coil 590 610 - -
Bva13g03159 892 Gene3D - 255 429 IPR036457 -
Bva13g03159 892 MobiDBLite consensus disorder prediction 492 511 - -
Bva13g03159 892 MobiDBLite consensus disorder prediction 457 479 - -
Bva13g03159 892 MobiDBLite consensus disorder prediction 457 511 - -
Bva13g03159 892 ProSiteProfiles PPM-type phosphatase domain profile. 278 883 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03159 Bva-Chr13 22138367 22143154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03159 1 892 PP2C-type Phosphatase Gene Family AT2G46920 63.880 0.0 1115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03159 - - gmx:100786856 1412.51