Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03154 ATGACAATGAAGCTGATTTTAATAGCCATTGGTTTTGTTTGCTTTGTTTCTGGGGTTATCTGCAGTGGATCTGAGAGAGAGCCTCCGCTTTCTTATTTGGAAAACGATTTCGCCATGGCAAGATCTTCCGCCTCGCCCCAACCTCTCATGGTCGGCCTCACTCTCATCGAAGGAGCTGATTCTAAAGGAGCCGTCTGTTTGGATGGGACACTTCCTGGTTACCATTTGCATCGTGGATTTGGTTCTGGTGCAAATAGTTGGCTCGTTGAATTGGAGGGTGGTGGGTGGTGTAATACCATTAGGAATTGCGTCTTTAGAAAAACTACTCGTCGTGGGTCCTCAAAGTACATGGAAAAGCAATTACCATTCACGGGAATATTGAGCAATAAAGCTGAAGAAAATcctgATTTCTTCAACTGGAACAGAGTCATAGTGCGGTATTGTGATGGGGCTTCCTTCAGTGGAGATAGTGAGAATGAGGCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCCATGGAGGAGTTTATGTCCAAGGGAATGCAGAATGCCGATCAGGCCCTTCTCTCTGGCTGCTCTGCTGGTGGTCTGGCAACAATAATACATTGTGATGAGTTCCGAGGGTTGTTTCCAAAATCTACCAAAGTGAAATGTCTGAGCGATGCAGGATTCTTCCTTGATGCAATTGATGTATCTGGTGGACACACTCTGAGGAATCTGTATGATGGTGTAGTTCACTTGcagGAAGTACAAAAGAATCTTCCAGCAAGTTGTGTTGACCGCCTGGATCCAACTTCGTGCTTCTTTCCTCAGAATTTGGTTGAACATGTTCAGACTCCATTGTTTCTACTCAATGCAGCCTATGATGCATGGCAGGTCCAATCGAGTTTAGCCCCACCTTCAGCTGATCCTTCTGGCTCTTGGCATGATTGCAAATCAAACCATGCAAGTTGTAACTCTTCTCAGATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTTAATGCCATCAAAGATTTCTCAAGGTCAGCTCAAACTGGATTATTCATAAATTCCTGTTTTGCTCATTGCCAAACTGTGAGACAGGACACATGGTTTGCTGATGACTCTCCCCTTATTAGAAATAAGCCTATTGCAATTGCTGTTGGAGACTGGTATTTTGATCGGCAAAGTGTCAAAGCTATTGACTGTGCTTACCCTTGTGACACCACCTGCCATAATCTAGTCTTCAATGATGATACACTTGCCCCGGTTCTTTCCCAGCCTACGAGTTATGTTACCTTTGCCACGATATACTCCCAGTCTGCAAGGTTAACTCTTACCCCATCTATGCCTGCTAACTGCCTTATTGTTCATCACAAGTTCCTAATGCACTG 1385 0.4412 MTMKLILIAIGFVCFVSGVICSGSEREPPLSYLENDFAMARSSASPQPLMVGLTLIEGADSKGAVCLDGTLPGYHLHRGFGSGANSWLVELEGGGWCNTIRNCVFRKTTRRGSSKYMEKQLPFTGILSNKAEENPDFFNWNRVIVRYCDGASFSGDSENEAAQLQFRGQKIWLAAMEEFMSKGMQNADQALLSGCSAGGLATIIHCDEFRGLFPKSTKVKCLSDAGFFLDAIDVSGGHTLRNLYDGVVHLQEVQKNLPASCVDRLDPTSCFFPQNLVEHVQTPLFLLNAAYDAWQVQSSLAPPSADPSGSWHDCKSNHASCNSSQIQFLQDFRNQMLNAIKDFSRSAQTGLFINSCFAHCQTVRQDTWFADDSPLIRNKPIAIAVGDWYFDRQSVKAIDCAYPCDTTCHNLVFNDDTLAPVLSQPTSYVTFATIYSQSARLTLTPSMPANCLIVHHKFLMH 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03154 461 PANTHER PECTIN ACETYLESTERASE 3 429 - -
Bva13g03154 461 Pfam Pectinacetylesterase 45 394 IPR004963 GO:0016787
Bva13g03154 461 PANTHER NOTUM-RELATED 3 429 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03154 Bva-Chr13 22112955 22117775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03154 6 443 Carbohydrate Esterase AT3G62060 64.206 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03154 K19882 - gmx:100786972 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03171 04 25920692 25924702 Bva13g03154 13 22112955 22117775 BWGD